Aliases for LOC105379244 Gene

Data sources for LOC105379244 Gene:

RNA type for LOC105379244 Gene

ncRNA

Aliases for LOC105379244 Gene

External Ids for LOC105379244 Gene

Previous GeneCards Identifiers for LOC105379244 Gene

  • GC08U902244

Summaries for LOC105379244 Gene

GeneCards Summary for LOC105379244 Gene

LOC105379244 (Uncharacterized LOC105379244) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105379244 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105379244 Gene

Genomics for LOC105379244 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105379244 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J011942 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas 250.7 -0.2 -163 2 MYC NCOR1 NFIC REST HES1 BHLHE40 MBD2 MNT RXRA TAL1 ENSG00000287755 HSALNG0063467-004 LOC105379244 piR-35002-101 DEFB136 DEFB135 ENSG00000269918 FAM66A FAM86B2 HSALNG0063467-003
GH08J011943 Enhancer 1 Ensembl ENCODE 250.7 +1.3 1272 0.6 ZNF654 ZNF600 REST TRIM22 BHLHE40 ZNF341 MNT CTCF SIN3A SAP130 HSALNG0063467-004 LOC105379244 LOC112268017 DEFB136 HSALNG0063467-003 CTSB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379244 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105379244 Gene

Latest Assembly
chr8:11,942,564-11,948,627
(GRCh38/hg38)
Size:
6,064 bases
Orientation:
Plus strand

Alternative Locations (GRCh38/hg38)

  • chr8(PATCHES):1,399,495-1,405,466 (-)

Genomic View for LOC105379244 Gene

Genes around LOC105379244 on UCSC Golden Path with GeneCards custom track
LOC105379244 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105379244 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379244 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105379244 Gene

Proteins for LOC105379244 Gene

Post-translational modifications for LOC105379244 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379244 Gene

Domains & Families for LOC105379244 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105379244 Gene

Function for LOC105379244 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379244 Gene

Localization for LOC105379244 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379244 Gene

Pathways & Interactions for LOC105379244 Gene

PathCards logo

SuperPathways for LOC105379244 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105379244 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105379244 Gene

Drugs & Compounds for LOC105379244 Gene

No Compound Related Data Available

Transcripts for LOC105379244 Gene

LOC105379244 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379244 Gene

No ASD Table

Relevant External Links for LOC105379244 Gene

GeneLoc Exon Structure for
LOC105379244

No data available for mRNA/cDNA for LOC105379244 Gene

Expression for LOC105379244 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379244 Gene

Orthologs for LOC105379244 Gene

No data available for Orthologs and Evolution for LOC105379244 Gene

Paralogs for LOC105379244 Gene

No data available for Paralogs for LOC105379244 Gene

Variants for LOC105379244 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105379244 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379244 Gene

Disorders for LOC105379244 Gene

No disorders were found for LOC105379244 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379244 Gene

Publications for LOC105379244 Gene

No publications were found for LOC105379244 Gene.

No data available for Mastermind for LOC105379244 Gene

Products for LOC105379244 Gene

Sources for LOC105379244 Gene