Aliases for LOC105379041 Gene

Subcategory (RNA class) for LOC105379041 Gene

ncRNA

Aliases for LOC105379041 Gene

  • Uncharacterized LOC105379041 3
  • CTC-235G5.3 3

External Ids for LOC105379041 Gene

Previous GeneCards Identifiers for LOC105379041 Gene

  • GC05U902055

Summaries for LOC105379041 Gene

GeneCards Summary for LOC105379041 Gene

LOC105379041 (Uncharacterized LOC105379041) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105379041 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105379041 Gene

Genomics for LOC105379041 Gene

GeneHancer (GH) Regulatory Elements for LOC105379041 Gene

Promoters and enhancers for LOC105379041 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J076082 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 500.7 -1.1 -1115 2.2 ZNF10 ZIC2 ZBTB26 HDAC2 MXI1 ZNF341 EZH2 MYC SMC3 SP2 ENSG00000248127 LOC105379041 SV2C
GH05J076083 Enhancer 0.5 Ensembl 500.7 +0.7 685 0.2 MXI1 ZNF335 SUZ12 KLF1 CTBP2 ZNF596 EZH2 GLIS2 PRDM1 ENSG00000248127 LOC105379041 SV2C LOC100132039
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379041 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105379041 Gene

Genomic Locations for LOC105379041 Gene
chr5:76,081,412-76,082,986
(GRCh38/hg38)
Size:
1,575 bases
Orientation:
Minus strand

Genomic View for LOC105379041 Gene

Genes around LOC105379041 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105379041 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379041 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105379041 Gene

Proteins for LOC105379041 Gene

Post-translational modifications for LOC105379041 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379041 Gene

Domains & Families for LOC105379041 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105379041 Gene

Function for LOC105379041 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379041 Gene

Localization for LOC105379041 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379041 Gene

Pathways & Interactions for LOC105379041 Gene

PathCards logo

SuperPathways for LOC105379041 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105379041 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105379041 Gene

Drugs & Compounds for LOC105379041 Gene

No Compound Related Data Available

Transcripts for LOC105379041 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379041 Gene

No ASD Table

Relevant External Links for LOC105379041 Gene

GeneLoc Exon Structure for
LOC105379041

No data available for mRNA/cDNA for LOC105379041 Gene

Expression for LOC105379041 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379041 Gene

Orthologs for LOC105379041 Gene

No data available for Orthologs and Evolution for LOC105379041 Gene

Paralogs for LOC105379041 Gene

No data available for Paralogs for LOC105379041 Gene

Variants for LOC105379041 Gene

Additional dbSNP identifiers (rs#s) for LOC105379041 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379041 Gene

Disorders for LOC105379041 Gene

No disorders were found for LOC105379041 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379041 Gene

Publications for LOC105379041 Gene

No publications were found for LOC105379041 Gene.

No data available for Mastermind for LOC105379041 Gene

Products for LOC105379041 Gene

Sources for LOC105379041 Gene