Aliases for LOC105378929 Gene

Subcategory (RNA class) for LOC105378929 Gene

ncRNA

Aliases for LOC105378929 Gene

  • Uncharacterized LOC105378929 3

External Ids for LOC105378929 Gene

Previous GeneCards Identifiers for LOC105378929 Gene

  • GC01U905210

Summaries for LOC105378929 Gene

GeneCards Summary for LOC105378929 Gene

LOC105378929 (Uncharacterized LOC105378929) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378929 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378929 Gene

Genomics for LOC105378929 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378929 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J117820 Enhancer 1.1 Ensembl ENCODE 600.7 +0.0 21 3.3 GATAD2A TFE3 SOX13 RCOR2 JUND RXRB ZNF24 IRF2 ZNF740 DPF2 LOC105378929 MAN1A2 WDR3 ENSG00000271427 PNRC2P1 GDAP2 TENT5C
GH01J117824 Enhancer 0.8 Ensembl ENCODE 0.4 -5.2 -5166 4.6 PRDM10 SMARCC1 JUND CEBPB FOS JUN RCOR1 FOSL1 MAX EP300 WDR3 LOC105378929 piR-52294-006 GDAP2 TENT5C
GH01J117814 Enhancer 0.7 Ensembl ENCODE 0.4 +6.2 6219 2.3 CTCF REST FOS ZFHX2 RAD21 SMC3 HLF PKNOX1 LOC105378929 PNRC2P1 GDAP2 TENT5C
GH01J117812 Enhancer 0.7 Ensembl 0.4 +8.7 8657 1 RXRB IRF2 SP1 FOXA2 YY1 HHEX NR2F2 JUND SMAD4 BCL6 LOC105378929 PNRC2P1 GDAP2 TENT5C
GH01J117780 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 0.3 +40.4 40358 2 ATF7 ZNF600 RFX1 HMBOX1 CTBP1 ATF2 SMARCA4 CHD2 NCOA3 NONHSAG002558.2 PNRC2P1 LOC105378929 GDAP2 TENT5C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378929 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378929 Gene

Genomic Locations for LOC105378929 Gene
chr1:117,815,142-117,821,758
(GRCh38/hg38)
Size:
6,617 bases
Orientation:
Minus strand

Genomic View for LOC105378929 Gene

Genes around LOC105378929 on UCSC Golden Path with GeneCards custom track
LOC105378929 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105378929 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378929 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378929 Gene

Proteins for LOC105378929 Gene

Post-translational modifications for LOC105378929 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378929 Gene

Domains & Families for LOC105378929 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378929 Gene

Function for LOC105378929 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378929 Gene

Localization for LOC105378929 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378929 Gene

Pathways & Interactions for LOC105378929 Gene

PathCards logo

SuperPathways for LOC105378929 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378929 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378929 Gene

Drugs & Compounds for LOC105378929 Gene

No Compound Related Data Available

Transcripts for LOC105378929 Gene

LOC105378929 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378929 Gene

No ASD Table

Relevant External Links for LOC105378929 Gene

GeneLoc Exon Structure for
LOC105378929

No data available for mRNA/cDNA for LOC105378929 Gene

Expression for LOC105378929 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378929 Gene

Orthologs for LOC105378929 Gene

No data available for Orthologs and Evolution for LOC105378929 Gene

Paralogs for LOC105378929 Gene

No data available for Paralogs for LOC105378929 Gene

Variants for LOC105378929 Gene

Additional dbSNP identifiers (rs#s) for LOC105378929 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378929 Gene

Disorders for LOC105378929 Gene

No disorders were found for LOC105378929 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378929 Gene

Publications for LOC105378929 Gene

No publications were found for LOC105378929 Gene.

No data available for Mastermind for LOC105378929 Gene

Products for LOC105378929 Gene

Sources for LOC105378929 Gene