Aliases for LOC105378924 Gene

Data sources for LOC105378924 Gene:

Subcategory (RNA class) for LOC105378924 Gene

ncRNA

Aliases for LOC105378924 Gene

External Ids for LOC105378924 Gene

Previous GeneCards Identifiers for LOC105378924 Gene

  • GC01U904631

Summaries for LOC105378924 Gene

GeneCards Summary for LOC105378924 Gene

LOC105378924 (Uncharacterized LOC105378924) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378924 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378924 Gene

Genomics for LOC105378924 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378924 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J116586 Enhancer 1.2 FANTOM5 Ensembl ENCODE 250.7 +1.2 1187 7.4 BCL11A ZIC2 EBF1 CTBP1 JUND ZBTB48 STAT5A ZNF189 ELF1 NRF1 LOC105378924 RF01045-010 IGSF3 MIR320B1 CD58 CD101 ATP1A1 TTF2
GH01J116594 Enhancer 0.8 ENCODE 0.4 +7.9 7938 4.3 BCL11A MNT CTCF ZIC2 ARNT REST NBN TRIM22 TAL1 SMC3 CD58 IGSF3 MIR320B1 LINC02868 RF01045-010 LOC105378924 HSALNG0006344
GH01J116574 Enhancer 0.7 ENCODE 0.4 -14.3 -14309 0.2 ZNF217 CTCF ARNT REST TRIM22 MAFF SMC3 RAD21 RFX5 ZNF316 IGSF3 MIR320B1 CD58 LOC105378924
GH01J116573 Enhancer 0.6 ENCODE 0.4 -14.9 -14940 0.5 FOSL1 CTCF STAT5A EP400 ZNF589 TCF7 RBM39 CSDE1 ZMYM3 ZNF584 ATP1A1-AS1 IGSF3 MIR320B1 CD58 LOC105378924 lnc-ATP1A1-1
GH01J116577 Enhancer 0.3 Ensembl 0.4 -11.2 -11212 1.4 CEBPB CTCF IGSF3 MIR320B1 CD58 LOC105378924
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378924 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378924 Gene

Latest Assembly
chr1:116,589,113-116,598,451
(GRCh38/hg38)
Size:
9,339 bases
Orientation:
Plus strand

Genomic View for LOC105378924 Gene

Genes around LOC105378924 on UCSC Golden Path with GeneCards custom track
LOC105378924 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105378924 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378924 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378924 Gene

Proteins for LOC105378924 Gene

Post-translational modifications for LOC105378924 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378924 Gene

Domains & Families for LOC105378924 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378924 Gene

Function for LOC105378924 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378924 Gene

Localization for LOC105378924 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378924 Gene

Pathways & Interactions for LOC105378924 Gene

PathCards logo

SuperPathways for LOC105378924 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378924 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378924 Gene

Drugs & Compounds for LOC105378924 Gene

No Compound Related Data Available

Transcripts for LOC105378924 Gene

LOC105378924 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378924 Gene

No ASD Table

Relevant External Links for LOC105378924 Gene

GeneLoc Exon Structure for
LOC105378924

No data available for mRNA/cDNA for LOC105378924 Gene

Expression for LOC105378924 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378924 Gene

Orthologs for LOC105378924 Gene

No data available for Orthologs and Evolution for LOC105378924 Gene

Paralogs for LOC105378924 Gene

No data available for Paralogs for LOC105378924 Gene

Variants for LOC105378924 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105378924 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378924 Gene

Disorders for LOC105378924 Gene

No disorders were found for LOC105378924 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378924 Gene

Publications for LOC105378924 Gene

No publications were found for LOC105378924 Gene.

No data available for Mastermind for LOC105378924 Gene

Products for LOC105378924 Gene

Sources for LOC105378924 Gene