Aliases for LOC105378901 Gene

Subcategory (RNA class) for LOC105378901 Gene

ncRNA

Aliases for LOC105378901 Gene

  • Uncharacterized LOC105378901 3

External Ids for LOC105378901 Gene

Previous GeneCards Identifiers for LOC105378901 Gene

  • GC01U904489

Summaries for LOC105378901 Gene

GeneCards Summary for LOC105378901 Gene

LOC105378901 (Uncharacterized LOC105378901) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378901 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378901 Gene

Genomics for LOC105378901 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378901 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J110774 Enhancer 0.2 Ensembl 600.7 -0.2 -157 0.2 LOC105378901 ENSG00000259834 piR-61532-015 KCNA3 CD53
GH01J110770 Enhancer 0.7 Ensembl ENCODE 0.7 +3.0 2967 2.4 FOXA1 ATF7 CTBP1 ZNF217 CUX1 GATA3 DPF2 JUND FOS SMARCE1 KCNA2 KCNA3 KCNA10 LOC105378901 ENSG00000199710 CD53
GH01J110784 Enhancer 0.9 FANTOM5 ENCODE 0.4 -12.3 -12324 4.4 SP1 RELA EED ARID3A RUNX3 ZEB1 ASH2L CBFB TCF12 BCL11A KCNA2 STRIP1 CD53 KCNA10 DENND2D DRAM2 LOC105378901 piR-61532-015 KCNA3
GH01J110780 Enhancer 0.8 ENCODE 0.4 -6.7 -6720 0.2 CTCF POLR2A JUND ZNF143 REST RAD21 TRIM22 EZH2 ZNF37A CTBP1 LOC105378901 piR-61532-015 CD53 KCNA3
GH01J110783 Enhancer 0.7 ENCODE 0.4 -9.1 -9140 0.2 CTCF JUND PRDM1 ZNF143 REST RAD21 TRIM22 YY1 RUNX3 SMC3 LOC105378901 piR-61532-015 CD53 KCNA3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378901 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378901 Gene

Genomic Locations for LOC105378901 Gene
chr1:110,748,884-110,774,344
(GRCh38/hg38)
Size:
25,461 bases
Orientation:
Minus strand

Genomic View for LOC105378901 Gene

Genes around LOC105378901 on UCSC Golden Path with GeneCards custom track
LOC105378901 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105378901 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378901 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378901 Gene

Proteins for LOC105378901 Gene

Post-translational modifications for LOC105378901 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378901 Gene

Domains & Families for LOC105378901 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378901 Gene

Function for LOC105378901 Gene

Phenotypes From GWAS Catalog for LOC105378901 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378901 Gene

Localization for LOC105378901 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378901 Gene

Pathways & Interactions for LOC105378901 Gene

PathCards logo

SuperPathways for LOC105378901 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378901 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378901 Gene

Drugs & Compounds for LOC105378901 Gene

No Compound Related Data Available

Transcripts for LOC105378901 Gene

LOC105378901 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378901 Gene

No ASD Table

Relevant External Links for LOC105378901 Gene

GeneLoc Exon Structure for
LOC105378901

No data available for mRNA/cDNA for LOC105378901 Gene

Expression for LOC105378901 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378901 Gene

Orthologs for LOC105378901 Gene

No data available for Orthologs and Evolution for LOC105378901 Gene

Paralogs for LOC105378901 Gene

No data available for Paralogs for LOC105378901 Gene

Variants for LOC105378901 Gene

Additional dbSNP identifiers (rs#s) for LOC105378901 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378901 Gene

Disorders for LOC105378901 Gene

No disorders were found for LOC105378901 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378901 Gene

Publications for LOC105378901 Gene

No publications were found for LOC105378901 Gene.

No data available for Mastermind for LOC105378901 Gene

Products for LOC105378901 Gene

Sources for LOC105378901 Gene