Aliases for LOC105378821 Gene

Subcategory (RNA class) for LOC105378821 Gene

ncRNA

Aliases for LOC105378821 Gene

  • Uncharacterized LOC105378821 3

External Ids for LOC105378821 Gene

Previous GeneCards Identifiers for LOC105378821 Gene

  • GC01U904579

Summaries for LOC105378821 Gene

GeneCards Summary for LOC105378821 Gene

LOC105378821 (Uncharacterized LOC105378821) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378821 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378821 Gene

Genomics for LOC105378821 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378821 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J085224 Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -0.1 -78 2.6 CEBPG TEAD4 PRDM10 LEF1 IKZF1 TARDBP JUND FOXA1 DDX20 PRDM1 LOC105378821 lnc-WDR63-2 C1orf52 SYDE2 piR-42694-010
GH01J085229 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 +4.3 4335 0.2 ZSCAN5C OSR2 ZBTB17 PKNOX1 ELF1 WT1 SAP130 ZNF335 ZNF610 ZNF18 SYDE2 LOC105378821 lnc-WDR63-2 C1orf52
GH01J085223 Enhancer 0.7 Ensembl dbSUPER 0.7 -2.1 -2078 0.2 DDX20 PKNOX1 NFIC STAT5A BHLHE40 ZNF146 ZEB2 MEIS2 ZNF24 RAD51 SYDE2 LOC105378821 piR-42694-010 C1orf52
GH01J085219 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -5.0 -5004 1.9 PRDM10 LEF1 IKZF1 JUND PKNOX1 DPF2 HDAC1 SOX6 FOXJ2 TCF12 ENSG00000223653 LOC105378821 piR-42694-010 SYDE2 C1orf52
GH01J085243 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 0.4 +19.2 19180 2.9 LEF1 PKNOX1 BRD9 DPF2 ZNF341 EP300 ZBTB44 CBX3 ZNF766 MTA3 ENSG00000223653 C1orf52 LOC105378821 lnc-WDR63-2 SYDE2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378821 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378821 Gene

Genomic Locations for LOC105378821 Gene
chr1:85,225,579-85,247,341
(GRCh38/hg38)
Size:
21,763 bases
Orientation:
Plus strand

Genomic View for LOC105378821 Gene

Genes around LOC105378821 on UCSC Golden Path with GeneCards custom track
LOC105378821 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105378821 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378821 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378821 Gene

Proteins for LOC105378821 Gene

Post-translational modifications for LOC105378821 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378821 Gene

Domains & Families for LOC105378821 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378821 Gene

Function for LOC105378821 Gene

Phenotypes From GWAS Catalog for LOC105378821 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378821 Gene

Localization for LOC105378821 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378821 Gene

Pathways & Interactions for LOC105378821 Gene

PathCards logo

SuperPathways for LOC105378821 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378821 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378821 Gene

Drugs & Compounds for LOC105378821 Gene

No Compound Related Data Available

Transcripts for LOC105378821 Gene

LOC105378821 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378821 Gene

No ASD Table

Relevant External Links for LOC105378821 Gene

GeneLoc Exon Structure for
LOC105378821

No data available for mRNA/cDNA for LOC105378821 Gene

Expression for LOC105378821 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378821 Gene

Orthologs for LOC105378821 Gene

No data available for Orthologs and Evolution for LOC105378821 Gene

Paralogs for LOC105378821 Gene

No data available for Paralogs for LOC105378821 Gene

Variants for LOC105378821 Gene

Additional dbSNP identifiers (rs#s) for LOC105378821 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378821 Gene

Disorders for LOC105378821 Gene

No disorders were found for LOC105378821 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378821 Gene

Publications for LOC105378821 Gene

No publications were found for LOC105378821 Gene.

No data available for Mastermind for LOC105378821 Gene

Products for LOC105378821 Gene

Sources for LOC105378821 Gene