LOC105378810 Gene (RNA Gene)

Uncharacterized LOC105378810

GC01P079270
GIFtS:
1
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Aliases for LOC105378810 Gene

Data sources for LOC105378810 Gene:

Subcategory (RNA class) for LOC105378810 Gene

ncRNA

Aliases for LOC105378810 Gene

External Ids for LOC105378810 Gene

Previous GeneCards Identifiers for LOC105378810 Gene

  • GC01U904502

Summaries for LOC105378810 Gene

GeneCards Summary for LOC105378810 Gene

LOC105378810 (Uncharacterized LOC105378810) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378810 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378810 Gene

Genomics for LOC105378810 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC105378810 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J079268 Enhancer 0.2 Ensembl 250.7 -1.9 -1874 0.2 LOC105378810 lnc-IFI44-2 piR-33422-010 piR-31470-017 ADGRL4 L13713-008 IFI44
GH01J079322 Enhancer 0.9 Ensembl ENCODE 0.2 +53.0 52972 1.9 ZEB1 CEBPB MAX EP300 CTBP1 RFX5 STAT3 TCF7L2 USF2 CTCF ENSG00000235011 LOC105378811 LINC02792 lnc-ADGRL4-4 RPL23P3 ENSG00000282898 ADGRL4 lnc-IFI44-2 LOC105378810
GH01J079293 Enhancer 0.4 Ensembl ENCODE 0.3 +23.6 23626 1.2 MAFK ENSG00000235011 PSAT1P3 LOC105378812 ADGRL4 lnc-ADGRL4-3 LOC105378810 lnc-IFI44-2
GH01J079302 Enhancer 0.3 Ensembl 0.3 +32.8 32826 0.8 RAD51 PKNOX1 lnc-ADGRL4-3 LOC105378812 ADGRL4 lnc-IFI44-2 LOC105378810
GH01J079304 Enhancer 0.3 Ensembl 0.3 +33.9 33926 0.2 CEBPB lnc-ADGRL4-3 LOC105378812 ADGRL4 lnc-IFI44-2 LOC105378810
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378810 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378810 Gene

Latest Assembly
chr1:79,270,375-79,405,767
(GRCh38/hg38)
Size:
135,393 bases
Orientation:
Plus strand

Genomic View for LOC105378810 Gene

Genes around LOC105378810 on UCSC Golden Path with GeneCards custom track
LOC105378810 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105378810 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378810 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105378810 Gene

Proteins for LOC105378810 Gene

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  3. Assay products for research

Post-translational modifications for LOC105378810 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378810 Gene

Domains & Families for LOC105378810 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378810 Gene

Function for LOC105378810 Gene

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  3. miRNA products for research
  4. Inhibitory RNAs for research
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  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378810 Gene

Localization for LOC105378810 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378810 Gene

Pathways & Interactions for LOC105378810 Gene

PathCards logo

SuperPathways for LOC105378810 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378810 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378810 Gene

Drugs & Compounds for LOC105378810 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for LOC105378810 Gene

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  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research
LOC105378810 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378810 Gene

No ASD Table

Relevant External Links for LOC105378810 Gene

GeneLoc Exon Structure for
LOC105378810

No data available for mRNA/cDNA for LOC105378810 Gene

Expression for LOC105378810 Gene

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No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378810 Gene

Orthologs for LOC105378810 Gene

No data available for Orthologs and Evolution for LOC105378810 Gene

Paralogs for LOC105378810 Gene

No data available for Paralogs for LOC105378810 Gene

Variants for LOC105378810 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105378810 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378810 Gene

Disorders for LOC105378810 Gene

No disorders were found for LOC105378810 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378810 Gene

Publications for LOC105378810 Gene

No publications were found for LOC105378810 Gene.

No data available for Mastermind for LOC105378810 Gene

Products for LOC105378810 Gene

Sources for LOC105378810 Gene