LOC105378789 Gene (RNA Gene)

Uncharacterized LOC105378789

GC01P069453
GIFtS:
2

Aliases for LOC105378789 Gene

Subcategory (RNA class) for LOC105378789 Gene

ncRNA

Aliases for LOC105378789 Gene

  • Uncharacterized LOC105378789 3

External Ids for LOC105378789 Gene

Previous GeneCards Identifiers for LOC105378789 Gene

  • GC01U904703

Summaries for LOC105378789 Gene

GeneCards Summary for LOC105378789 Gene

LOC105378789 (Uncharacterized LOC105378789) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378789 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378789 Gene

Genomics for LOC105378789 Gene

GeneHancer (GH) Regulatory Elements for LOC105378789 Gene

Promoters and enhancers for LOC105378789 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J069498 Enhancer 0.6 ENCODE 0.3 +44.4 44417 0.2 NCOR1 TAL1 TCF12 GATA2 PRDM10 DPF2 NR2F6 ZNF507 SMARCE1 TEAD4 HSALNG0004349 piR-40476-006 LOC105378789
GH01J069539 Enhancer 1.1 Ensembl ENCODE 0.2 +85.9 85939 1.6 PHB2 ZBTB11 AFF1 HES1 MYC TOE1 CTBP1 MIER1 HDAC3 NCOR1 LRRC7 piR-40476-006 ENSG00000287453 LOC105378789
GH01J069522 Enhancer 0.6 Ensembl ENCODE 0.2 +69.9 69925 1.6 MAFK NR2F6 CEBPB BHLHE40 IKZF1 NR2F2 LRRC7 piR-40476-006 HSALNG0004349 LOC105378789
GH01J069450 Enhancer 0.2 Ensembl 0.7 -2.7 -2675 0.4 LOC105378789 LINC01758
GH01J069432 Enhancer 0.3 Ensembl 0.4 -20.8 -20775 0.6 FOS LINC01758 LOC105378789
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378789 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378789 Gene

Genomic Locations for LOC105378789 Gene
chr1:69,453,676-69,557,821
(GRCh38/hg38)
Size:
104,146 bases
Orientation:
Plus strand

Genomic View for LOC105378789 Gene

Genes around LOC105378789 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378789 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378789 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105378789 Gene

Proteins for LOC105378789 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105378789 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378789 Gene

Domains & Families for LOC105378789 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378789 Gene

Function for LOC105378789 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378789 Gene

Localization for LOC105378789 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378789 Gene

Pathways & Interactions for LOC105378789 Gene

PathCards logo

SuperPathways for LOC105378789 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105378789 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378789 Gene

Drugs & Compounds for LOC105378789 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105378789 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378789 Gene

No ASD Table

Relevant External Links for LOC105378789 Gene

GeneLoc Exon Structure for
LOC105378789

No data available for mRNA/cDNA for LOC105378789 Gene

Expression for LOC105378789 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378789 Gene

Orthologs for LOC105378789 Gene

No data available for Orthologs and Evolution for LOC105378789 Gene

Paralogs for LOC105378789 Gene

No data available for Paralogs for LOC105378789 Gene

Variants for LOC105378789 Gene

Additional dbSNP identifiers (rs#s) for LOC105378789 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378789 Gene

Disorders for LOC105378789 Gene

No disorders were found for LOC105378789 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378789 Gene

Publications for LOC105378789 Gene

No publications were found for LOC105378789 Gene.

No data available for Mastermind for LOC105378789 Gene

Products for LOC105378789 Gene

Sources for LOC105378789 Gene