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Aliases for LOC105378789 Gene
Summaries for LOC105378789 Gene
GeneCards Summary for LOC105378789 Gene
LOC105378789 (Uncharacterized LOC105378789) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105378789 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378789 Gene
Genomics for LOC105378789 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC105378789 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J069450 | Enhancer | 0.2 | Ensembl | 600.7 | -1.9 | -1900 | 0.4 | LOC105378789 LINC01758 LRRC7 DEPDC1 | ||
| GH01J069539 | Enhancer | 1 | Ensembl ENCODE | 0.2 | +86.7 | 86714 | 1.6 | LEF1 IKZF1 DDX20 PKNOX1 MTA1 BRD9 ZNF24 DPF2 HDAC1 SOX6 | LRRC7 SRSF11 piR-40476-006 ENSG00000287453 LOC105378789 | |
| GH01J069498 | Enhancer | 0.6 | ENCODE | 0.3 | +45.2 | 45192 | 0.2 | IKZF1 MTA1 HDAC1 SOX6 EP300 NCOR1 TAL1 NR2F6 DPF2 ZNF507 | SRSF11 HSALNG0004349 piR-40476-006 LOC105378789 LRRC7 | |
| GH01J069522 | Enhancer | 0.6 | Ensembl ENCODE | 0.2 | +70.7 | 70700 | 1.6 | CEBPB BHLHE40 MAFK NR2F6 IKZF1 | LRRC7 piR-40476-006 HSALNG0004349 LOC105378789 | |
| GH01J069474 | Enhancer | 0.2 | ENCODE | 0.4 | +22.4 | 22444 | 1.2 | HSALNG0004349 LOC105378789 piR-40476-006 LRRC7 DEPDC1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105378789 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LOC105378789 Gene
Genomic Locations for LOC105378789 Gene
- chr1:69,452,901-69,557,821
- (GRCh38/hg38)
- Size:
- 104,921 bases
- Orientation:
- Plus strand
Genomic View for LOC105378789 Gene
Genes around LOC105378789 on UCSC Golden Path with GeneCards custom track
LOC105378789 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 1p31.1 by Entrez Gene
LOC105378789 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105378789 Gene
Proteins for LOC105378789 Gene
Post-translational modifications for LOC105378789 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105378789
- Origene Custom Protein Services for LOC105378789
No data available for DME Specific Peptides for LOC105378789 Gene
Domains & Families for LOC105378789 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378789 Gene
Function for LOC105378789 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378789 Gene
Localization for LOC105378789 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378789 Gene
Transcripts for LOC105378789 Gene
LOC105378789 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC105378789 Gene
- GeneLoc Exon Structure for
- LOC105378789
No data available for mRNA/cDNA for LOC105378789 Gene
Expression for LOC105378789 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378789 Gene
Orthologs for LOC105378789 Gene
No data available for Orthologs and Evolution for LOC105378789 Gene
Paralogs for LOC105378789 Gene
No data available for Paralogs for LOC105378789 Gene
Variants for LOC105378789 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378789 Gene
Disorders for LOC105378789 Gene
No disorders were found for LOC105378789 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378789 Gene
Publications for LOC105378789 Gene
No publications were found for LOC105378789 Gene.
No data available for Mastermind for LOC105378789 Gene
Products for LOC105378789 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105378789
- Origene Custom Protein Services for LOC105378789
- Browse OriGene Inhibitory RNA Products For LOC105378789
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC105378789
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC105378789
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
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- Browse Sino Biological Assays
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- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC105378789
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC105378789
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC105378789
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC105378789
Sources for LOC105378789 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB