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Aliases for LOC105378782 Gene

Subcategory (RNA class) for LOC105378782 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105378782 Gene

  • Uncharacterized LOC105378782 3

External Ids for LOC105378782 Gene

Previous GeneCards Identifiers for LOC105378782 Gene

  • GC01U904610

Summaries for LOC105378782 Gene

GeneCards Summary for LOC105378782 Gene

LOC105378782 (Uncharacterized LOC105378782) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378782 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105378782 Gene

Genomics for LOC105378782 Gene

GeneHancer (GH) Regulatory Elements for LOC105378782 Gene

Promoters and enhancers for LOC105378782 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I068291 Enhancer 1.1 Ensembl ENCODE 550.8 -0.1 -95 3.5 PKNOX1 ATF1 FEZF1 ZNF2 TCF12 ZNF766 GATA2 ATF7 NCOA1 REST LOC105378782 MIR1262 RPE65 WLS COX6B1P7
GH01I068330 Enhancer 0.8 ENCODE 0.3 +38.0 38015 1.8 INSM2 FEZF1 ZNF2 ZEB1 ZNF366 SCRT2 FOS KLF13 EGR2 ZNF362 MIR1262 WLS LOC105378782 ELOCP18
GH01I068322 Enhancer 0.7 Ensembl ENCODE 0.3 +29.9 29893 2.4 ATF4 JUND ZIC2 ZFX MIR1262 RPE65 LOC105378782 ELOCP18
GH01I068342 Enhancer 0.8 ENCODE 0.2 +49.6 49551 0.2 FOXA2 ZSCAN4 KLF17 ZNF2 RAD21 ZNF213 ZNF366 SCRT2 ZNF143 ZNF391 ELOCP18 LOC105378782
GH01I068343 Enhancer 0.8 Ensembl 0.2 +49.3 49319 0.2 FOXA2 ZSCAN4 KLF17 ZNF2 RAD21 ZNF213 ZNF366 SCRT2 ZNF143 ZNF391 ELOCP18 LOC105378782
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105378782 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378782 Gene

Genomic Locations for LOC105378782 Gene
chr1:68,293,382-68,303,696
(GRCh38/hg38)
Size:
10,315 bases
Orientation:
Plus strand

Genomic View for LOC105378782 Gene

Genes around LOC105378782 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378782 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378782 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378782 Gene

Proteins for LOC105378782 Gene

Post-translational modifications for LOC105378782 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378782 Gene

Domains & Families for LOC105378782 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105378782 Gene

Function for LOC105378782 Gene

Phenotypes From GWAS Catalog for LOC105378782 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378782 Gene

Localization for LOC105378782 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378782 Gene

Pathways & Interactions for LOC105378782 Gene

SuperPathways for LOC105378782 Gene

No Data Available

Interacting Proteins for LOC105378782 Gene

Gene Ontology (GO) - Biological Process for LOC105378782 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105378782 Gene

Drugs & Compounds for LOC105378782 Gene

No Compound Related Data Available

Transcripts for LOC105378782 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378782 Gene

No ASD Table

Relevant External Links for LOC105378782 Gene

GeneLoc Exon Structure for
LOC105378782

No data available for mRNA/cDNA for LOC105378782 Gene

Expression for LOC105378782 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378782 Gene

Orthologs for LOC105378782 Gene

No data available for Orthologs and Evolution for LOC105378782 Gene

Paralogs for LOC105378782 Gene

No data available for Paralogs for LOC105378782 Gene

Variants for LOC105378782 Gene

Sequence variations from dbSNP and Humsavar for LOC105378782 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000073654 -- 68,300,197(+) G/T intron_variant
rs1000134722 -- 68,294,404(+) C/T intron_variant
rs1000157246 -- 68,298,441(+) C/T intron_variant
rs1000490697 -- 68,299,922(+) T/G intron_variant
rs1000626686 -- 68,298,705(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378782 Gene

Disorders for LOC105378782 Gene

No disorders were found for LOC105378782 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378782 Gene

Publications for LOC105378782 Gene

No publications were found for LOC105378782 Gene.

Products for LOC105378782 Gene

Sources for LOC105378782 Gene

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