Free for academic non-profit institutions. Other users need a Commercial license
Aliases for LOC105378779 Gene
Summaries for LOC105378779 Gene
GeneCards Summary for LOC105378779 Gene
LOC105378779 (Uncharacterized LOC105378779) is an RNA Gene, and is affiliated with the ncRNA class.
Additional gene information for LOC105378779 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378779 Gene
Genomics for LOC105378779 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC105378779 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J067400 | Enhancer | 1 | Ensembl ENCODE | 600.7 | -0.1 | -71 | 2.2 | ZNF629 RFX1 DDX20 PRDM1 PKNOX1 PATZ1 REST DPF2 ZNF600 ZNF639 | LOC105378779 lnc-IL12RB2-1 SERBP1 RNU4ATAC4P RNU6-387P RF00026-048 IL12RB2 | |
| GH01J067405 | Enhancer | 0.6 | Ensembl | 0.7 | -4.6 | -4571 | 0.4 | ZNF629 POLR2A ZNF600 ZEB1 OSR2 FOSL1 NR2F1 PRDM4 KLF17 NR2F6 | SERBP1 RNU4ATAC4P LOC105378779 RF00026-048 RNU6-387P IL12RB2 | |
| GH01J067402 | Enhancer | 0.5 | FANTOM5 | 0.7 | -2.5 | -2462 | 0.4 | ZSCAN4 TARDBP SCRT1 POLR2A ZFP37 | RNU4ATAC4P LOC105378779 RF00026-048 RNU6-387P SERBP1 IL12RB2 | |
| GH01J067407 | Enhancer | 0.6 | Ensembl ENCODE | 0.4 | -7.9 | -7874 | 1.1 | ZNF600 POLR2A CEBPB ZBTB17 NFATC1 ZNF121 | IL12RB2 RNU6-387P RF00026-048 LOC105378779 SERBP1 | |
| GH01J067412 | Enhancer | 0.4 | UCNEbase | 0.4 | -13.2 | -13150 | 0.3 | DPF2 | RF00026-048 RNU6-387P lnc-C1orf141-2 LOC105378779 SERBP1 IL12RB2 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC105378779 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LOC105378779 Gene
Genomic Locations for LOC105378779 Gene
- chr1:67,398,518-67,399,830
- (GRCh38/hg38)
- Size:
- 1,313 bases
- Orientation:
- Minus strand
Genomic View for LOC105378779 Gene
Genes around LOC105378779 on UCSC Golden Path with GeneCards custom track
LOC105378779 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 1p31.3 by Entrez Gene
LOC105378779 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC105378779 Gene
Proteins for LOC105378779 Gene
Post-translational modifications for LOC105378779 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105378779
- Origene Custom Protein Services for LOC105378779
No data available for DME Specific Peptides for LOC105378779 Gene
Domains & Families for LOC105378779 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378779 Gene
Function for LOC105378779 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378779 Gene
Localization for LOC105378779 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378779 Gene
Transcripts for LOC105378779 Gene
LOC105378779 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC105378779 Gene
- GeneLoc Exon Structure for
- LOC105378779
No data available for mRNA/cDNA for LOC105378779 Gene
Expression for LOC105378779 Gene
No Expression Related Data Available
Primer Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378779 Gene
Orthologs for LOC105378779 Gene
No data available for Orthologs and Evolution for LOC105378779 Gene
Paralogs for LOC105378779 Gene
No data available for Paralogs for LOC105378779 Gene
Variants for LOC105378779 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378779 Gene
Disorders for LOC105378779 Gene
No disorders were found for LOC105378779 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378779 Gene
Publications for LOC105378779 Gene
No publications were found for LOC105378779 Gene.
No data available for Mastermind for LOC105378779 Gene
Products for LOC105378779 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC105378779
- Origene Custom Protein Services for LOC105378779
- Browse OriGene Inhibitory RNA Products For LOC105378779
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC105378779
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC105378779
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC105378779
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC105378779
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC105378779
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC105378779
Sources for LOC105378779 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB