LOC105378776 Gene (RNA Gene)

Uncharacterized LOC105378776

GC01P066416
GIFtS:
2
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Aliases for LOC105378776 Gene

Subcategory (RNA class) for LOC105378776 Gene

ncRNA

Aliases for LOC105378776 Gene

  • Uncharacterized LOC105378776 3

External Ids for LOC105378776 Gene

Previous GeneCards Identifiers for LOC105378776 Gene

  • GC01U904406

Summaries for LOC105378776 Gene

GeneCards Summary for LOC105378776 Gene

LOC105378776 (Uncharacterized LOC105378776) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378776 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378776 Gene

Genomics for LOC105378776 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC105378776 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J066412 Enhancer 0.9 FANTOM5 Ensembl 600.7 +0.4 442 10 CEBPG SP1 SCRT2 CEBPB FOXA2 ATF3 YY1 ZBTB33 JUND EP300 LOC105378776 lnc-PDE4B-1 piR-38599-002 PDE4B SLC35D1 TCTEX1D1 SGIP1
GH01J066436 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 +21.9 21941 5 CTCF PRDM1 RELA IKZF2 TRIM22 EED ARID3A DPF2 SMARCC1 CEBPB PDE4B TCTEX1D1 SLC35D1 MIER1 piR-36921-002 LOC105378776 lnc-PDE4B-1 piR-57176-032 SGIP1
GH01J066433 Enhancer 0.4 Ensembl ENCODE 0.4 +17.6 17624 0.9 CEBPB SLC35D1 piR-36921-002 lnc-PDE4B-1 LOC105378776 piR-57176-032 SGIP1 PDE4B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378776 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378776 Gene

Genomic Locations for LOC105378776 Gene
chr1:66,416,559-66,439,650
(GRCh38/hg38)
Size:
23,092 bases
Orientation:
Plus strand

Genomic View for LOC105378776 Gene

Genes around LOC105378776 on UCSC Golden Path with GeneCards custom track
LOC105378776 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105378776 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378776 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105378776 Gene

Proteins for LOC105378776 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105378776 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378776 Gene

Domains & Families for LOC105378776 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378776 Gene

Function for LOC105378776 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LOC105378776 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378776 Gene

Localization for LOC105378776 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378776 Gene

Pathways & Interactions for LOC105378776 Gene

PathCards logo

SuperPathways for LOC105378776 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378776 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378776 Gene

Drugs & Compounds for LOC105378776 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105378776 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
LOC105378776 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378776 Gene

No ASD Table

Relevant External Links for LOC105378776 Gene

GeneLoc Exon Structure for
LOC105378776

No data available for mRNA/cDNA for LOC105378776 Gene

Expression for LOC105378776 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378776 Gene

Orthologs for LOC105378776 Gene

No data available for Orthologs and Evolution for LOC105378776 Gene

Paralogs for LOC105378776 Gene

No data available for Paralogs for LOC105378776 Gene

Variants for LOC105378776 Gene

Additional dbSNP identifiers (rs#s) for LOC105378776 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378776 Gene

Disorders for LOC105378776 Gene

No disorders were found for LOC105378776 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378776 Gene

Publications for LOC105378776 Gene

No publications were found for LOC105378776 Gene.

No data available for Mastermind for LOC105378776 Gene

Products for LOC105378776 Gene

Sources for LOC105378776 Gene