Aliases for LOC105378771 Gene

Data sources for LOC105378771 Gene:

Subcategory (RNA class) for LOC105378771 Gene

ncRNA

Aliases for LOC105378771 Gene

External Ids for LOC105378771 Gene

Previous GeneCards Identifiers for LOC105378771 Gene

  • GC01U904236
  • GC01P063669

Summaries for LOC105378771 Gene

GeneCards Summary for LOC105378771 Gene

LOC105378771 (Uncharacterized LOC105378771) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378771 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378771 Gene

Genomics for LOC105378771 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378771 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J063669 Enhancer 0.4 Ensembl ENCODE 250.7 +1.3 1340 1 ZBTB17 LOC105378771 ROR1 HSALNG0004130 lnc-ITGB3BP-6 ITGB3BP
GH01J063673 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas 0.4 +6.7 6726 2.2 ZSCAN16 MXD4 CEBPA CTCF ZIC2 HOMEZ KDM6A THAP11 REST FOXA2 ROR1 LOC105378771 HSALNG0004130 lnc-ITGB3BP-6 ITGB3BP
GH01J063661 Enhancer 1 FANTOM5 Ensembl ENCODE 0.4 -5.6 -5560 3.6 PRDM1 RFX5 TEAD3 TBP TCF7L2 JUND POLR2A ZFX EGR2 ZNF311 HSALNG0004130 ITGB3BP UBE2U DOCK7 ROR1 LOC105378771
GH01J063691 Enhancer 0.9 Ensembl ENCODE 0.3 +23.8 23834 1.2 CEBPA CTCF CEBPB TRIM22 EP300 SMC3 RAD21 RFX5 PRDM6 ZNF589 lnc-ITGB3BP-6 ROR1 LOC105378771 HSALNG0004130 ITGB3BP
GH01J063697 Enhancer 0.8 Ensembl ENCODE 0.3 +30.6 30640 2.8 BRCA1 CEBPB MAX EP300 TAL1 RFX5 FOSL1 TCF7L2 REST TCF12 lnc-ITGB3BP-6 LOC105378771 HSALNG0004130 ROR1 ITGB3BP
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378771 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378771 Gene

Latest Assembly
chr1:63,668,361-63,728,052
(GRCh38/hg38)
Size:
59,692 bases
Orientation:
Plus strand

Genomic View for LOC105378771 Gene

Genes around LOC105378771 on UCSC Golden Path with GeneCards custom track
LOC105378771 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105378771 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378771 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378771 Gene

Proteins for LOC105378771 Gene

Post-translational modifications for LOC105378771 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378771 Gene

Domains & Families for LOC105378771 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378771 Gene

Function for LOC105378771 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378771 Gene

Localization for LOC105378771 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378771 Gene

Pathways & Interactions for LOC105378771 Gene

PathCards logo

SuperPathways for LOC105378771 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378771 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378771 Gene

Drugs & Compounds for LOC105378771 Gene

No Compound Related Data Available

Transcripts for LOC105378771 Gene

LOC105378771 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378771 Gene

No ASD Table

Relevant External Links for LOC105378771 Gene

GeneLoc Exon Structure for
LOC105378771

No data available for mRNA/cDNA for LOC105378771 Gene

Expression for LOC105378771 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378771 Gene

Orthologs for LOC105378771 Gene

No data available for Orthologs and Evolution for LOC105378771 Gene

Paralogs for LOC105378771 Gene

No data available for Paralogs for LOC105378771 Gene

Variants for LOC105378771 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105378771 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378771 Gene

Disorders for LOC105378771 Gene

No disorders were found for LOC105378771 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378771 Gene

Publications for LOC105378771 Gene

No publications were found for LOC105378771 Gene.

No data available for Mastermind for LOC105378771 Gene

Products for LOC105378771 Gene

Sources for LOC105378771 Gene