Aliases for LOC105378770 Gene

Subcategory (RNA class) for LOC105378770 Gene

ncRNA

Aliases for LOC105378770 Gene

  • Uncharacterized LOC105378770 3

External Ids for LOC105378770 Gene

Previous GeneCards Identifiers for LOC105378770 Gene

  • GC01U904456

Summaries for LOC105378770 Gene

GeneCards Summary for LOC105378770 Gene

LOC105378770 (Uncharacterized LOC105378770) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378770 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378770 Gene

Genomics for LOC105378770 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378770 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J063173 Enhancer 0.7 Ensembl 600.7 +0.1 96 0.6 ZIC2 ZNF561 ARNT ZXDB ZSCAN5C ZNF580 PRDM4 HIC1 ZNF843 FEZF1 LOC105378770 RF00994-020 lnc-FOXD3-2 LINC00466 FOXD3 ATG4C
GH01J063189 Enhancer 0.7 Ensembl ENCODE 0.4 +15.9 15896 3 CTCF TEAD4 CEBPB RAD21 SMC3 ETS1 SIN3A NANOG POLR2A SP1 ITGB3BP RNA5SP49 lnc-FOXD3-2 LOC105378770 RF00017-232 LINC00466 FOXD3 ATG4C
GH01J063185 Enhancer 0.2 Ensembl 0.4 +12.3 12296 0.2 RNA5SP49 RF00994-020 LOC105378770 lnc-FOXD3-2 LINC00466 FOXD3 ATG4C
GH01J063191 Enhancer 0.2 Ensembl 0.4 +17.9 17896 0.2 RNA5SP49 lnc-FOXD3-2 LOC105378770 RF00017-232 LINC00466 FOXD3 ATG4C
GH01J063192 Enhancer 0.2 Ensembl 0.4 +18.3 18296 0.2 RNA5SP49 lnc-FOXD3-2 LOC105378770 RF00017-232 LINC00466 FOXD3 ATG4C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378770 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378770 Gene

Genomic Locations for LOC105378770 Gene
chr1:63,173,205-63,198,709
(GRCh38/hg38)
Size:
25,505 bases
Orientation:
Plus strand

Genomic View for LOC105378770 Gene

Genes around LOC105378770 on UCSC Golden Path with GeneCards custom track
LOC105378770 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105378770 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378770 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378770 Gene

Proteins for LOC105378770 Gene

Post-translational modifications for LOC105378770 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378770 Gene

Domains & Families for LOC105378770 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378770 Gene

Function for LOC105378770 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378770 Gene

Localization for LOC105378770 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378770 Gene

Pathways & Interactions for LOC105378770 Gene

PathCards logo

SuperPathways for LOC105378770 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378770 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378770 Gene

Drugs & Compounds for LOC105378770 Gene

No Compound Related Data Available

Transcripts for LOC105378770 Gene

LOC105378770 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378770 Gene

No ASD Table

Relevant External Links for LOC105378770 Gene

GeneLoc Exon Structure for
LOC105378770

No data available for mRNA/cDNA for LOC105378770 Gene

Expression for LOC105378770 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378770 Gene

Orthologs for LOC105378770 Gene

No data available for Orthologs and Evolution for LOC105378770 Gene

Paralogs for LOC105378770 Gene

No data available for Paralogs for LOC105378770 Gene

Variants for LOC105378770 Gene

Additional dbSNP identifiers (rs#s) for LOC105378770 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378770 Gene

Disorders for LOC105378770 Gene

No disorders were found for LOC105378770 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378770 Gene

Publications for LOC105378770 Gene

No publications were found for LOC105378770 Gene.

No data available for Mastermind for LOC105378770 Gene

Products for LOC105378770 Gene

Sources for LOC105378770 Gene