Aliases for LOC105378674 Gene

Subcategory (RNA class) for LOC105378674 Gene

ncRNA

Aliases for LOC105378674 Gene

  • Uncharacterized LOC105378674 3

External Ids for LOC105378674 Gene

Previous GeneCards Identifiers for LOC105378674 Gene

  • GC01U904429

Summaries for LOC105378674 Gene

GeneCards Summary for LOC105378674 Gene

LOC105378674 (Uncharacterized LOC105378674) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378674 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378674 Gene

Genomics for LOC105378674 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378674 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J040673 Enhancer 0.3 Ensembl 600.7 +0.9 879 0.2 ZIC2 ZBTB17 LOC105378674 RIMS3 MIR30C1 MIR30E ENSG00000287743 ENSG00000237899 NFYC ZNF684
GH01J040677 Enhancer 0.2 Ensembl 600.7 -1.9 -1921 0.2 LOC105378674 MIR30E MIR30C1 ENSG00000237899 RIMS3 NFYC ZNF684
GH01J040662 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +9.8 9776 3.6 CTCF PRDM10 ZNF692 BACH1 JUND LARP7 ZNF143 MTA2 ZIC2 RBFOX2 RIMS3 ENSG00000238287 ENSG00000287743 LOC105378674 LOC105378675 NFYC ZNF684
GH01J040668 Enhancer 0.8 ENCODE 0.4 +5.5 5526 0.2 HNRNPL GATAD2A CTCF ZNF692 JUND LARP7 ZNF143 RELA ZIC2 PATZ1 NFYC MIR30C1 MIR30E ENSG00000287743 LOC105378674 ENSG00000237899 RIMS3 ZNF684
GH01J040686 Enhancer 0.6 Ensembl dbSUPER 0.4 -13.0 -13021 2 ZNF316 MAFF MAFK ZBTB33 ENSG00000237899 KCNQ4 NFYC NFYC-AS1 RIMS3 LOC105378674 ZNF684
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378674 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378674 Gene

Genomic Locations for LOC105378674 Gene
chr1:40,668,530-40,674,580
(GRCh38/hg38)
Size:
6,051 bases
Orientation:
Minus strand

Genomic View for LOC105378674 Gene

Genes around LOC105378674 on UCSC Golden Path with GeneCards custom track
LOC105378674 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105378674 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378674 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378674 Gene

Proteins for LOC105378674 Gene

Post-translational modifications for LOC105378674 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378674 Gene

Domains & Families for LOC105378674 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378674 Gene

Function for LOC105378674 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378674 Gene

Localization for LOC105378674 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378674 Gene

Pathways & Interactions for LOC105378674 Gene

PathCards logo

SuperPathways for LOC105378674 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378674 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378674 Gene

Drugs & Compounds for LOC105378674 Gene

No Compound Related Data Available

Transcripts for LOC105378674 Gene

LOC105378674 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378674 Gene

No ASD Table

Relevant External Links for LOC105378674 Gene

GeneLoc Exon Structure for
LOC105378674

No data available for mRNA/cDNA for LOC105378674 Gene

Expression for LOC105378674 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378674 Gene

Orthologs for LOC105378674 Gene

No data available for Orthologs and Evolution for LOC105378674 Gene

Paralogs for LOC105378674 Gene

No data available for Paralogs for LOC105378674 Gene

Variants for LOC105378674 Gene

Additional dbSNP identifiers (rs#s) for LOC105378674 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378674 Gene

Disorders for LOC105378674 Gene

No disorders were found for LOC105378674 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378674 Gene

Publications for LOC105378674 Gene

No publications were found for LOC105378674 Gene.

No data available for Mastermind for LOC105378674 Gene

Products for LOC105378674 Gene

Sources for LOC105378674 Gene