Aliases for LOC105378657 Gene

Subcategory (RNA class) for LOC105378657 Gene

ncRNA

Aliases for LOC105378657 Gene

  • Uncharacterized LOC105378657 3

External Ids for LOC105378657 Gene

Previous GeneCards Identifiers for LOC105378657 Gene

  • GC01U905067

Summaries for LOC105378657 Gene

GeneCards Summary for LOC105378657 Gene

LOC105378657 (Uncharacterized LOC105378657) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378657 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378657 Gene

Genomics for LOC105378657 Gene

GeneHancer (GH) Regulatory Elements for LOC105378657 Gene

Promoters and enhancers for LOC105378657 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J038502 Enhancer 0.4 ENCODE 500.7 +0.5 470 0.2 CTCF REST RAD21 SMC3 LOC105378657 LINC01685
GH01J038473 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 +27.7 27661 3.7 EP300 SIN3A SP1 REST RELA MEF2C RCOR1 TRIM22 POLR2A NFYB LINC01685 LOC105378657
GH01J038489 Enhancer 0.8 Ensembl ENCODE 0.4 +13.3 13254 1.2 CTCF NRF1 REST RAD21 CTBP1 NFYB SMC3 POLR2A MYNN MAX LOC105378657 LINC01685
GH01J038482 Enhancer 0.8 FANTOM5 Ensembl dbSUPER 0.4 +19.3 19253 7.2 ZNF585B GLIS1 SPI1 CBX5 PKNOX1 RAD51 LINC01685 LOC105378657
GH01J038493 Enhancer 0.6 FANTOM5 Ensembl 0.4 +10.6 10553 2.6 SPI1 ZBTB33 IKZF1 AKIRIN1 LOC105378657 LINC01685
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378657 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378657 Gene

Genomic Locations for LOC105378657 Gene
chr1:38,300,262-38,503,454
(GRCh38/hg38)
Size:
203,193 bases
Orientation:
Minus strand

Genomic View for LOC105378657 Gene

Genes around LOC105378657 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378657 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378657 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378657 Gene

Proteins for LOC105378657 Gene

Post-translational modifications for LOC105378657 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378657 Gene

Domains & Families for LOC105378657 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378657 Gene

Function for LOC105378657 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378657 Gene

Localization for LOC105378657 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378657 Gene

Pathways & Interactions for LOC105378657 Gene

PathCards logo

SuperPathways for LOC105378657 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105378657 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378657 Gene

Drugs & Compounds for LOC105378657 Gene

No Compound Related Data Available

Transcripts for LOC105378657 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378657 Gene

No ASD Table

Relevant External Links for LOC105378657 Gene

GeneLoc Exon Structure for
LOC105378657

No data available for mRNA/cDNA for LOC105378657 Gene

Expression for LOC105378657 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378657 Gene

Orthologs for LOC105378657 Gene

No data available for Orthologs and Evolution for LOC105378657 Gene

Paralogs for LOC105378657 Gene

No data available for Paralogs for LOC105378657 Gene

Variants for LOC105378657 Gene

Additional dbSNP identifiers (rs#s) for LOC105378657 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378657 Gene

Disorders for LOC105378657 Gene

No disorders were found for LOC105378657 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378657 Gene

Publications for LOC105378657 Gene

No publications were found for LOC105378657 Gene.

No data available for Mastermind for LOC105378657 Gene

Products for LOC105378657 Gene

Sources for LOC105378657 Gene