Aliases for LOC105378651 Gene

Subcategory (RNA class) for LOC105378651 Gene

ncRNA

Aliases for LOC105378651 Gene

  • Uncharacterized LOC105378651 3

External Ids for LOC105378651 Gene

Previous GeneCards Identifiers for LOC105378651 Gene

  • GC01U904240
  • GC01P037932

Summaries for LOC105378651 Gene

GeneCards Summary for LOC105378651 Gene

LOC105378651 (Uncharacterized LOC105378651) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378651 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378651 Gene

Genomics for LOC105378651 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378651 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J037930 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas 600.7 -0.3 -254 3.2 SP1 HNRNPL CREB1 TEAD4 RFX1 KDM1A BACH1 FOS JUND DDX20 LOC105378651 SF3A3 C1orf109 SNIP1 GNL2 FHL3 UTP11 INPP5B HSALNG0002670 MTF1
GH01J037944 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +14.6 14617 3.2 GATAD2A PRDM10 ZNF629 SIX5 IKZF1 ZNF692 JUND LARP7 MTA2 ZNF143 INPP5B HSALNG0002674 FHL3 SF3A3 MYCBP GNL2 MN298678-004 LOC105378651 MTF1
GH01J037921 Enhancer 0.9 ENCODE 0.4 -9.4 -9412 2.7 HNRNPL LEF1 IKZF1 JUND STAT3 ZNF143 MTA2 RELA PKNOX1 MTA1 SF3A3 INPP5B C1orf109 FTH1P1 MYCBP RNU6-510P ENSG00000230955 MTF1 GNL2 YRDC
GH01J037939 Enhancer 0.8 Ensembl ENCODE 0.4 +8.4 8438 1 HNRNPL FOXA1 SP1 SCRT2 FOXA2 YY1 GABPA PKNOX1 SCRT1 JUND MN298114-002 MN298678-004 hsa-miR-5095-014 LOC105378651 INPP5B MTF1
GH01J037924 Enhancer 0.7 ENCODE 0.4 -5.7 -5733 2.6 SP1 ZNF143 PKNOX1 DPF2 RUNX3 ASH2L ZNF316 ARNT USF2 IKZF1 SF3A3 INPP5B FHL3 LOC105378651 HSALNG0002670 MTF1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378651 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378651 Gene

Genomic Locations for LOC105378651 Gene
chr1:37,931,969-37,945,749
(GRCh38/hg38)
Size:
13,781 bases
Orientation:
Plus strand

Genomic View for LOC105378651 Gene

Genes around LOC105378651 on UCSC Golden Path with GeneCards custom track
LOC105378651 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105378651 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378651 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378651 Gene

Proteins for LOC105378651 Gene

Post-translational modifications for LOC105378651 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378651 Gene

Domains & Families for LOC105378651 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378651 Gene

Function for LOC105378651 Gene

Phenotypes From GWAS Catalog for LOC105378651 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378651 Gene

Localization for LOC105378651 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378651 Gene

Pathways & Interactions for LOC105378651 Gene

PathCards logo

SuperPathways for LOC105378651 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378651 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378651 Gene

Drugs & Compounds for LOC105378651 Gene

No Compound Related Data Available

Transcripts for LOC105378651 Gene

LOC105378651 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378651 Gene

No ASD Table

Relevant External Links for LOC105378651 Gene

GeneLoc Exon Structure for
LOC105378651

No data available for mRNA/cDNA for LOC105378651 Gene

Expression for LOC105378651 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378651 Gene

Orthologs for LOC105378651 Gene

No data available for Orthologs and Evolution for LOC105378651 Gene

Paralogs for LOC105378651 Gene

No data available for Paralogs for LOC105378651 Gene

Variants for LOC105378651 Gene

Additional dbSNP identifiers (rs#s) for LOC105378651 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378651 Gene

Disorders for LOC105378651 Gene

No disorders were found for LOC105378651 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378651 Gene

Publications for LOC105378651 Gene

No publications were found for LOC105378651 Gene.

No data available for Mastermind for LOC105378651 Gene

Products for LOC105378651 Gene

Sources for LOC105378651 Gene