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Aliases for LOC105378632 Gene

Subcategory (RNA class) for LOC105378632 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105378632 Gene

  • Uncharacterized LOC105378632 3

External Ids for LOC105378632 Gene

Previous GeneCards Identifiers for LOC105378632 Gene

  • GC01U904241

Summaries for LOC105378632 Gene

GeneCards Summary for LOC105378632 Gene

LOC105378632 (Uncharacterized LOC105378632) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378632 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105378632 Gene

Genomics for LOC105378632 Gene

GeneHancer (GH) Regulatory Elements for LOC105378632 Gene

Promoters and enhancers for LOC105378632 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I032900 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 550.8 +1.9 1948 1.6 RB1 KLF17 SIN3A ZBTB40 ZNF335 GLIS2 SMARCA5 IKZF1 GLIS1 KDM1A LOC105378632 TMEM54 FNDC5 S100PBP GC01P032892
GH01I032904 Enhancer 0.7 ENCODE dbSUPER 550.8 -1.6 -1584 1.5 BCOR ZNF366 ZNF512 ADNP ZMYM3 HNF4A LOC105378632 S100PBP PIR42811 GC01P032892
GH01I032902 Enhancer 0.5 dbSUPER 550.8 +0.5 534 1 GLIS2 ZNF362 DPF2 ZKSCAN1 TMEM54 LOC105378632 GC01P032892
GH01I032908 Enhancer 0.6 FANTOM5 dbSUPER 0.8 -4.9 -4923 0.2 GABPA RNF19B LOC105378632 PIR42811 GC01P032892
GH01I032906 Enhancer 0.2 dbSUPER 0.8 -3.5 -3491 0.7 LOC105378632 PIR42811 GC01P032892
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105378632 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378632 Gene

Genomic Locations for LOC105378632 Gene
chr1:32,901,660-32,903,203
(GRCh38/hg38)
Size:
1,544 bases
Orientation:
Minus strand

Genomic View for LOC105378632 Gene

Genes around LOC105378632 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378632 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378632 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378632 Gene

Proteins for LOC105378632 Gene

Post-translational modifications for LOC105378632 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378632 Gene

Domains & Families for LOC105378632 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105378632 Gene

Function for LOC105378632 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378632 Gene

Localization for LOC105378632 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378632 Gene

Pathways & Interactions for LOC105378632 Gene

SuperPathways for LOC105378632 Gene

No Data Available

Interacting Proteins for LOC105378632 Gene

Gene Ontology (GO) - Biological Process for LOC105378632 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105378632 Gene

Drugs & Compounds for LOC105378632 Gene

No Compound Related Data Available

Transcripts for LOC105378632 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378632 Gene

No ASD Table

Relevant External Links for LOC105378632 Gene

GeneLoc Exon Structure for
LOC105378632

No data available for mRNA/cDNA for LOC105378632 Gene

Expression for LOC105378632 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378632 Gene

Orthologs for LOC105378632 Gene

No data available for Orthologs and Evolution for LOC105378632 Gene

Paralogs for LOC105378632 Gene

No data available for Paralogs for LOC105378632 Gene

Variants for LOC105378632 Gene

Sequence variations from dbSNP and Humsavar for LOC105378632 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1001058557 -- 32,901,885(-) G/C non_coding_transcript_variant
rs1001110439 -- 32,901,223(-) C/T downstream_transcript_variant
rs1001173112 -- 32,904,229(-) TACTCTA/TA upstream_transcript_variant
rs1001688400 -- 32,901,317(-) C/T downstream_transcript_variant
rs1002116319 -- 32,903,083(-) T/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378632 Gene

Disorders for LOC105378632 Gene

No disorders were found for LOC105378632 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378632 Gene

Publications for LOC105378632 Gene

No publications were found for LOC105378632 Gene.

Products for LOC105378632 Gene

Sources for LOC105378632 Gene

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