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Aliases for LOC105378631 Gene

Subcategory (RNA class) for LOC105378631 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105378631 Gene

  • Uncharacterized LOC105378631 3

External Ids for LOC105378631 Gene

Previous GeneCards Identifiers for LOC105378631 Gene

  • GC01U904420

Summaries for LOC105378631 Gene

GeneCards Summary for LOC105378631 Gene

LOC105378631 (Uncharacterized LOC105378631) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378631 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105378631 Gene

Genomics for LOC105378631 Gene

GeneHancer (GH) Regulatory Elements for LOC105378631 Gene

Promoters and enhancers for LOC105378631 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J032876 Enhancer 1 ENCODE dbSUPER 650.7 +0.8 808 0.2 ATF1 RB1 KLF14 ZNF2 ZNF48 RAD21 ZNF335 GLIS2 ZNF143 RUNX3 LOC105378631 KIAA1522 AK2 AZIN2 HPCA
GH01J032885 Promoter/Enhancer 0.8 EPDnew dbSUPER 0.4 +10.0 9950 0.1 KLF9 HPCA LOC105378631
GH01J032880 Enhancer 0.6 dbSUPER 0.4 +5.8 5805 2.7 SP3 CEBPB SP2 ZNF16 ZIC2 ZNF121 POLR2A ZNF341 ZFP36 TXLNA RBBP4 ZBTB8A KPNA6 KIAA1522 AK2 AZIN2 KHDRBS1 ZSCAN20 EIF3I
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378631 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378631 Gene

Genomic Locations for LOC105378631 Gene
chr1:32,876,027-32,882,505
(GRCh38/hg38)
Size:
6,479 bases
Orientation:
Plus strand

Genomic View for LOC105378631 Gene

Genes around LOC105378631 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378631 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378631 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378631 Gene

Proteins for LOC105378631 Gene

Post-translational modifications for LOC105378631 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378631 Gene

Domains & Families for LOC105378631 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105378631 Gene

Function for LOC105378631 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378631 Gene

Localization for LOC105378631 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378631 Gene

Pathways & Interactions for LOC105378631 Gene

SuperPathways for LOC105378631 Gene

No Data Available

Interacting Proteins for LOC105378631 Gene

Gene Ontology (GO) - Biological Process for LOC105378631 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105378631 Gene

Drugs & Compounds for LOC105378631 Gene

No Compound Related Data Available

Transcripts for LOC105378631 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378631 Gene

No ASD Table

Relevant External Links for LOC105378631 Gene

GeneLoc Exon Structure for
LOC105378631

No data available for mRNA/cDNA for LOC105378631 Gene

Expression for LOC105378631 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378631 Gene

Orthologs for LOC105378631 Gene

No data available for Orthologs and Evolution for LOC105378631 Gene

Paralogs for LOC105378631 Gene

No data available for Paralogs for LOC105378631 Gene

Variants for LOC105378631 Gene

Sequence variations from dbSNP and Humsavar for LOC105378631 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000101263 -- 32,882,066(+) T/C intron_variant
rs1000157217 -- 32,875,603(+) A/G upstream_transcript_variant
rs1000253693 -- 32,878,897(+) C/T intron_variant
rs1000399347 -- 32,875,277(+) G/C upstream_transcript_variant
rs1000533908 -- 32,877,611(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378631 Gene

Disorders for LOC105378631 Gene

No disorders were found for LOC105378631 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378631 Gene

Publications for LOC105378631 Gene

No publications were found for LOC105378631 Gene.

Products for LOC105378631 Gene

Sources for LOC105378631 Gene

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