Aliases for LOC105378626 Gene

Subcategory (RNA class) for LOC105378626 Gene

ncRNA

Aliases for LOC105378626 Gene

  • Uncharacterized LOC105378626 3

External Ids for LOC105378626 Gene

Previous GeneCards Identifiers for LOC105378626 Gene

  • GC01U904538

Summaries for LOC105378626 Gene

GeneCards Summary for LOC105378626 Gene

LOC105378626 (Uncharacterized LOC105378626) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378626 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378626 Gene

Genomics for LOC105378626 Gene

GeneHancer (GH) Regulatory Elements for LOC105378626 Gene

Promoters and enhancers for LOC105378626 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J031572 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -1.3 -1288 13.3 EP300 POLR2G NCOR1 JUND TEAD4 FOS ZIC2 REST KDM6A TCF7 ENSG00000229167 LOC105378626 TINAGL1 SNRNP40 ENSG00000229447 ZBTB8B TXLNA SERINC2 PEF1 TSSK3
GH01J031594 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -16.5 -16468 1.6 CTCF ZIC2 REST RAD21 CTBP1 TRIM22 SMC3 TCF12 ZBTB17 ZNF263 PEF1 COL16A1 SERINC2 HCRTR1 LOC105378626
GH01J031587 Enhancer 0.9 ENCODE dbSUPER 0.4 -10.9 -10906 2.9 CTCF USF1 GABPA RAD21 TRIM22 HDAC2 KDM4B NR2F2 ZNF316 MAFF PEF1 SERINC2 HCRTR1 LOC105378626 TINAGL1
GH01J031591 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -14.1 -14078 1.2 USF1 ZIC2 ZBTB17 ZBTB48 SCRT1 GLIS1 ZNF24 ZFP3 PRDM10 GLIS2 PEF1 SERINC2 HCRTR1 LOC105378626
GH01J031605 Enhancer 1 Ensembl ENCODE 0.3 -28.4 -28379 1.8 RXRA SP1 EP300 RELA RCOR1 TRIM22 BCL11A ZNF266 TCF12 ZNF207 ENSG00000229167 SNRNP40 PEF1 TSSK3 TXLNA ENSG00000229447 TINAGL1 KHDRBS1 SERINC2 TMEM39B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378626 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378626 Gene

Genomic Locations for LOC105378626 Gene
chr1:31,568,236-31,577,922
(GRCh38/hg38)
Size:
9,687 bases
Orientation:
Minus strand

Genomic View for LOC105378626 Gene

Genes around LOC105378626 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378626 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378626 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378626 Gene

Proteins for LOC105378626 Gene

Post-translational modifications for LOC105378626 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378626 Gene

Domains & Families for LOC105378626 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378626 Gene

Function for LOC105378626 Gene

Phenotypes From GWAS Catalog for LOC105378626 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378626 Gene

Localization for LOC105378626 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378626 Gene

Pathways & Interactions for LOC105378626 Gene

PathCards logo

SuperPathways for LOC105378626 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105378626 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378626 Gene

Drugs & Compounds for LOC105378626 Gene

No Compound Related Data Available

Transcripts for LOC105378626 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378626 Gene

No ASD Table

Relevant External Links for LOC105378626 Gene

GeneLoc Exon Structure for
LOC105378626

No data available for mRNA/cDNA for LOC105378626 Gene

Expression for LOC105378626 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378626 Gene

Orthologs for LOC105378626 Gene

No data available for Orthologs and Evolution for LOC105378626 Gene

Paralogs for LOC105378626 Gene

No data available for Paralogs for LOC105378626 Gene

Variants for LOC105378626 Gene

Additional dbSNP identifiers (rs#s) for LOC105378626 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378626 Gene

Disorders for LOC105378626 Gene

No disorders were found for LOC105378626 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378626 Gene

Publications for LOC105378626 Gene

No publications were found for LOC105378626 Gene.

No data available for Mastermind for LOC105378626 Gene

Products for LOC105378626 Gene

Sources for LOC105378626 Gene