Aliases for LOC105378607 Gene

Subcategory (RNA class) for LOC105378607 Gene

ncRNA

Aliases for LOC105378607 Gene

  • Uncharacterized LOC105378607 3

External Ids for LOC105378607 Gene

Previous GeneCards Identifiers for LOC105378607 Gene

  • GC01U904446

Summaries for LOC105378607 Gene

GeneCards Summary for LOC105378607 Gene

LOC105378607 (Uncharacterized LOC105378607) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378607 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378607 Gene

Genomics for LOC105378607 Gene

GeneHancer (GH) Regulatory Elements for LOC105378607 Gene

Promoters and enhancers for LOC105378607 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J003609 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +7.0 7026 5.4 ZIC2 ZNF263 ZBTB26 EZH2 MXI1 ZNF341 MYC KLF9 SP2 USF1 MEGF6 WRAP73 TPRG1L LOC105378607 ENSG00000238260
GH01J003623 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +21.7 21749 3.7 FOXK2 ZBTB40 SIN3A NRF1 POLR2G USF1 SP1 NCOR1 PHF8 FOS TPRG1L ENSG00000238260 MEGF6 WRAP73 ENSG00000272153 LOC105378607
GH01J003595 Enhancer 1 FANTOM5 ENCODE CraniofacialAtlas 0.7 -4.4 -4365 2.8 ZIC2 RFX1 TFDP1 SPI1 GABPB1 E2F6 ZBTB7A BHLHE40 TBP EGR1 MEGF6 TPRG1L TP73 LOC105378607 MIR551A
GH01J003601 Enhancer 0.8 Ensembl 0.7 +2.4 2408 0.2 ZNF300 PHB2 ZBTB10 TRIM25 ZNF148 ARNT NKRF TRIM24 SRF ZNF707 TP73-AS1 C1orf174 DFFB ENSG00000272153 WRAP73 CEP104 LOC105378607 MEGF6 ENSG00000238260
GH01J003613 Enhancer 1 ENCODE CraniofacialAtlas dbSUPER 0.4 +10.7 10744 1.2 JUND TEAD4 FOS ZIC2 ZNF263 JUN FOSL1 SMARCC1 NR3C1 FOSL2 ENSG00000238260 LOC105378607 MEGF6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378607 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378607 Gene

Genomic Locations for LOC105378607 Gene
chr1:3,602,893-3,607,681
(GRCh38/hg38)
Size:
4,789 bases
Orientation:
Plus strand

Genomic View for LOC105378607 Gene

Genes around LOC105378607 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378607 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378607 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378607 Gene

Proteins for LOC105378607 Gene

Post-translational modifications for LOC105378607 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378607 Gene

Domains & Families for LOC105378607 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378607 Gene

Function for LOC105378607 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378607 Gene

Localization for LOC105378607 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378607 Gene

Pathways & Interactions for LOC105378607 Gene

PathCards logo

SuperPathways for LOC105378607 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105378607 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378607 Gene

Drugs & Compounds for LOC105378607 Gene

No Compound Related Data Available

Transcripts for LOC105378607 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378607 Gene

No ASD Table

Relevant External Links for LOC105378607 Gene

GeneLoc Exon Structure for
LOC105378607

No data available for mRNA/cDNA for LOC105378607 Gene

Expression for LOC105378607 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378607 Gene

Orthologs for LOC105378607 Gene

No data available for Orthologs and Evolution for LOC105378607 Gene

Paralogs for LOC105378607 Gene

No data available for Paralogs for LOC105378607 Gene

Variants for LOC105378607 Gene

Additional dbSNP identifiers (rs#s) for LOC105378607 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378607 Gene

Disorders for LOC105378607 Gene

No disorders were found for LOC105378607 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378607 Gene

Publications for LOC105378607 Gene

No publications were found for LOC105378607 Gene.

No data available for Mastermind for LOC105378607 Gene

Products for LOC105378607 Gene

Sources for LOC105378607 Gene