Aliases for LOC105378606 Gene

Subcategory (RNA class) for LOC105378606 Gene

ncRNA

Aliases for LOC105378606 Gene

  • Uncharacterized LOC105378606 3

External Ids for LOC105378606 Gene

Previous GeneCards Identifiers for LOC105378606 Gene

  • GC01U905235

Summaries for LOC105378606 Gene

GeneCards Summary for LOC105378606 Gene

LOC105378606 (Uncharacterized LOC105378606) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378606 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378606 Gene

Genomics for LOC105378606 Gene

GeneHancer (GH) Regulatory Elements for LOC105378606 Gene

Promoters and enhancers for LOC105378606 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J003168 Enhancer 0.3 ENCODE dbSUPER 500.7 -1.3 -1259 0.2 HSALNG0000308 LOC105378606 HSALNG0000309 PRDM16
GH01J003169 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.7 -3.5 -3547 4 NRF1 ZNF10 ZBTB7A ZNF341 SP2 CTCF TFDP1 SAP130 GABPB1 ZFHX2 PRDM16 LOC105378606 HSALNG0000309
GH01J003164 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 +2.1 2071 1.1 ZEB1 ZFHX2 DPF2 RCOR1 JUND JUN FOS MTA1 ZEB2 CREB1 HSALNG0000308 LOC105378606 RF00951-001 PRDM16
GH01J003161 Enhancer 0.8 FANTOM5 Ensembl dbSUPER 0.4 +6.2 6172 1.2 ZNF768 ZMYM3 EZH2 ZFP36 RF00951-001 TPRG1L HSALNG0000308 LOC105378606 PRDM16
GH01J003173 Enhancer 0.6 ENCODE dbSUPER 0.4 -6.9 -6944 2.6 EZH2 ATF2 GATA2 HSALNG0000309 LOC105378606 PRDM16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378606 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378606 Gene

Genomic Locations for LOC105378606 Gene
chr1:3,161,279-3,167,573
(GRCh38/hg38)
Size:
6,295 bases
Orientation:
Minus strand

Genomic View for LOC105378606 Gene

Genes around LOC105378606 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378606 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378606 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378606 Gene

Proteins for LOC105378606 Gene

Post-translational modifications for LOC105378606 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378606 Gene

Domains & Families for LOC105378606 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378606 Gene

Function for LOC105378606 Gene

Phenotypes From GWAS Catalog for LOC105378606 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378606 Gene

Localization for LOC105378606 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378606 Gene

Pathways & Interactions for LOC105378606 Gene

PathCards logo

SuperPathways for LOC105378606 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105378606 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378606 Gene

Drugs & Compounds for LOC105378606 Gene

No Compound Related Data Available

Transcripts for LOC105378606 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378606 Gene

No ASD Table

Relevant External Links for LOC105378606 Gene

GeneLoc Exon Structure for
LOC105378606

No data available for mRNA/cDNA for LOC105378606 Gene

Expression for LOC105378606 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378606 Gene

Orthologs for LOC105378606 Gene

No data available for Orthologs and Evolution for LOC105378606 Gene

Paralogs for LOC105378606 Gene

No data available for Paralogs for LOC105378606 Gene

Variants for LOC105378606 Gene

Additional dbSNP identifiers (rs#s) for LOC105378606 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378606 Gene

Disorders for LOC105378606 Gene

No disorders were found for LOC105378606 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378606 Gene

Publications for LOC105378606 Gene

No publications were found for LOC105378606 Gene.

No data available for Mastermind for LOC105378606 Gene

Products for LOC105378606 Gene

Sources for LOC105378606 Gene