Aliases for LOC105378482 Gene

Subcategory (RNA class) for LOC105378482 Gene

ncRNA

Aliases for LOC105378482 Gene

  • Uncharacterized LOC105378482 3

External Ids for LOC105378482 Gene

Previous GeneCards Identifiers for LOC105378482 Gene

  • GC10U902226

Summaries for LOC105378482 Gene

GeneCards Summary for LOC105378482 Gene

LOC105378482 (Uncharacterized LOC105378482) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378482 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378482 Gene

Genomics for LOC105378482 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378482 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J110446 Enhancer 1.1 Ensembl ENCODE dbSUPER 600.7 +0.1 109 2 IKZF1 REST DPF2 HDAC1 ZFX EP300 HMBOX1 JUND CTCF CEBPB LOC105378482 DUSP5 ENSG00000273143 HSALNG0080579 SMNDC1
GH10J110448 Enhancer 0.3 ENCODE 600.7 -1.1 -1117 0.1 RELB HMGB3P5 LOC105378482 DUSP5 ENSG00000273143 SMNDC1
GH10J110445 Enhancer 0.2 Ensembl 600.7 +1.6 1617 0.2 LOC105378482 DUSP5 HSALNG0080579 ENSG00000273143 SMNDC1
GH10J110419 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +21.5 21517 14 CREB1 PRDM10 ZNF512 RFX1 LEF1 IKZF1 BACH1 JUND FOXA1 RELA DUSP5 SMNDC1 SMC3 HMGB3P5 BBIP1 SHOC2 HSALNG0080579 LOC105378482 ENSG00000273143
GH10J110441 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +5.6 5617 1.4 PRDM10 LEF1 POLR2A JUND PKNOX1 HDAC1 NONO ELK1 RELB CTBP1 DUSP5 ENSG00000273143 LOC105378482 HSALNG0080579 SMNDC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378482 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378482 Gene

Genomic Locations for LOC105378482 Gene
chr10:110,428,880-110,447,518
(GRCh38/hg38)
Size:
18,639 bases
Orientation:
Minus strand

Genomic View for LOC105378482 Gene

Genes around LOC105378482 on UCSC Golden Path with GeneCards custom track
LOC105378482 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105378482 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378482 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378482 Gene

Proteins for LOC105378482 Gene

Post-translational modifications for LOC105378482 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378482 Gene

Domains & Families for LOC105378482 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378482 Gene

Function for LOC105378482 Gene

Phenotypes From GWAS Catalog for LOC105378482 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378482 Gene

Localization for LOC105378482 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378482 Gene

Pathways & Interactions for LOC105378482 Gene

PathCards logo

SuperPathways for LOC105378482 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378482 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378482 Gene

Drugs & Compounds for LOC105378482 Gene

No Compound Related Data Available

Transcripts for LOC105378482 Gene

LOC105378482 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378482 Gene

No ASD Table

Relevant External Links for LOC105378482 Gene

GeneLoc Exon Structure for
LOC105378482

No data available for mRNA/cDNA for LOC105378482 Gene

Expression for LOC105378482 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378482 Gene

Orthologs for LOC105378482 Gene

No data available for Orthologs and Evolution for LOC105378482 Gene

Paralogs for LOC105378482 Gene

No data available for Paralogs for LOC105378482 Gene

Variants for LOC105378482 Gene

Additional dbSNP identifiers (rs#s) for LOC105378482 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378482 Gene

Disorders for LOC105378482 Gene

No disorders were found for LOC105378482 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378482 Gene

Publications for LOC105378482 Gene

No publications were found for LOC105378482 Gene.

No data available for Mastermind for LOC105378482 Gene

Products for LOC105378482 Gene

Sources for LOC105378482 Gene