Aliases for LOC105378460 Gene

Subcategory (RNA class) for LOC105378460 Gene

ncRNA

Aliases for LOC105378460 Gene

  • Uncharacterized LOC105378460 3

External Ids for LOC105378460 Gene

Previous GeneCards Identifiers for LOC105378460 Gene

  • GC10U902142

Summaries for LOC105378460 Gene

GeneCards Summary for LOC105378460 Gene

LOC105378460 (Uncharacterized LOC105378460) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378460 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378460 Gene

Genomics for LOC105378460 Gene

GeneHancer (GH) Regulatory Elements for LOC105378460 Gene

Promoters and enhancers for LOC105378460 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J102654 Enhancer 0.4 dbSUPER 500.7 +0.2 166 1.4 RBM22 AGO2 RBFOX2 LOC105378460 SFXN2 MFSD13A ENSG00000272933 TRIM8
GH10J102655 Enhancer 0.3 dbSUPER 500.7 -1.1 -1127 0.5 RBM39 LOC105378460 SFXN2 TRIM8 RF00017-787
GH10J102641 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +7.4 7418 12.7 FOXK2 HNRNPK ZBTB40 ZNF217 EP300 CTCF SIN3A NRF1 TCF12 MYC TRIM8 SFXN2 MFSD13A AS3MT ARL3 NOLC1 ARMH3 NFKB2 ENSG00000272933 LOC105378460
GH10J102656 Enhancer 0.9 ENCODE dbSUPER 0.7 -3.2 -3189 2.8 POLR2G ZFX TCF7 SIN3A SAP130 RBM22 SPI1 NR2F2 CREM GATA3 SFXN2 ARL3 MFSD13A RNU11-3P RPARP-AS1 LOC105378460 TRIM8 RF00017-787
GH10J102659 Enhancer 1.3 ENCODE CraniofacialAtlas dbSUPER 0.4 -5.9 -5913 2.3 SIN3A POLR2G SP1 ZIC2 TCF7 ZNF423 RCOR1 TGIF2 TAF9B POLR2A SFXN2 ARL3 RNU11-3P MFSD13A LOC105378460 TRIM8 RF00017-787
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378460 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378460 Gene

Genomic Locations for LOC105378460 Gene
chr10:102,650,029-102,655,131
(GRCh38/hg38)
Size:
5,103 bases
Orientation:
Minus strand

Genomic View for LOC105378460 Gene

Genes around LOC105378460 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378460 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378460 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378460 Gene

Proteins for LOC105378460 Gene

Post-translational modifications for LOC105378460 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378460 Gene

Domains & Families for LOC105378460 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378460 Gene

Function for LOC105378460 Gene

Phenotypes From GWAS Catalog for LOC105378460 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378460 Gene

Localization for LOC105378460 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378460 Gene

Pathways & Interactions for LOC105378460 Gene

PathCards logo

SuperPathways for LOC105378460 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105378460 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378460 Gene

Drugs & Compounds for LOC105378460 Gene

No Compound Related Data Available

Transcripts for LOC105378460 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378460 Gene

No ASD Table

Relevant External Links for LOC105378460 Gene

GeneLoc Exon Structure for
LOC105378460

No data available for mRNA/cDNA for LOC105378460 Gene

Expression for LOC105378460 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378460 Gene

Orthologs for LOC105378460 Gene

No data available for Orthologs and Evolution for LOC105378460 Gene

Paralogs for LOC105378460 Gene

No data available for Paralogs for LOC105378460 Gene

Variants for LOC105378460 Gene

Additional dbSNP identifiers (rs#s) for LOC105378460 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378460 Gene

Disorders for LOC105378460 Gene

No disorders were found for LOC105378460 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378460 Gene

Publications for LOC105378460 Gene

No publications were found for LOC105378460 Gene.

No data available for Mastermind for LOC105378460 Gene

Products for LOC105378460 Gene

Sources for LOC105378460 Gene