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Aliases for LOC105378372 Gene

Subcategory (RNA class) for LOC105378372 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105378372 Gene

  • Uncharacterized LOC105378372 3

External Ids for LOC105378372 Gene

Previous GeneCards Identifiers for LOC105378372 Gene

  • GC10U902426

Summaries for LOC105378372 Gene

GeneCards Summary for LOC105378372 Gene

LOC105378372 (Uncharacterized LOC105378372) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378372 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105378372 Gene

Genomics for LOC105378372 Gene

GeneHancer (GH) Regulatory Elements for LOC105378372 Gene

Promoters and enhancers for LOC105378372 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J077709 Enhancer 0.9 FANTOM5 ENCODE 600.7 +0.9 874 1.3 RELA IKZF1 POLR2A IKZF2 ZIC2 PKNOX1 ZSCAN29 DPF2 RUNX3 NBN LOC105378372 KCNMA1 PIR46790 GC10P077663 GC10P077662 GC10P077661
GH10J077711 Enhancer 0.8 ENCODE 600.7 -0.4 -373 0.7 SP1 CTCF ZNF687 ZSCAN21 CREM RAD21 ZBTB8A ZNF600 BACH1 ZIC2 LOC105378372 ENSG00000213514
GH10J077702 Enhancer 0.9 Ensembl ENCODE 0.4 +8.6 8565 0.8 MZF1 ZIC2 ZNF692 RUNX3 ZBTB48 ZBTB17 NFIC PRDM4 IRF4 BATF LOC105378372 GC10P077663 GC10P077662 GC10P077661 PIR46790
GH10J077722 Enhancer 0.7 Ensembl ENCODE 0.4 -12.4 -12415 1.9 ZNF121 ZNF585B OSR2 ZBTB17 CUX1 ZNF366 FEZF1 KCNMA1 ENSG00000213514 LOC105378372
GH10J077713 Enhancer 0.4 Ensembl 0.7 -3.0 -2983 1 ZNF24 POLR2A IKZF1 LOC105378372 ENSG00000213514
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378372 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378372 Gene

Genomic Locations for LOC105378372 Gene
chr10:77,702,443-77,711,109
(GRCh38/hg38)
Size:
8,667 bases
Orientation:
Minus strand

Genomic View for LOC105378372 Gene

Genes around LOC105378372 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378372 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378372 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378372 Gene

Proteins for LOC105378372 Gene

Post-translational modifications for LOC105378372 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378372 Gene

Domains & Families for LOC105378372 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105378372 Gene

Function for LOC105378372 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378372 Gene

Localization for LOC105378372 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378372 Gene

Pathways & Interactions for LOC105378372 Gene

PathCards logo

SuperPathways for LOC105378372 Gene

No Data Available

Interacting Proteins for LOC105378372 Gene

Gene Ontology (GO) - Biological Process for LOC105378372 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105378372 Gene

Drugs & Compounds for LOC105378372 Gene

No Compound Related Data Available

Transcripts for LOC105378372 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378372 Gene

No ASD Table

Relevant External Links for LOC105378372 Gene

GeneLoc Exon Structure for
LOC105378372

No data available for mRNA/cDNA for LOC105378372 Gene

Expression for LOC105378372 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378372 Gene

Orthologs for LOC105378372 Gene

No data available for Orthologs and Evolution for LOC105378372 Gene

Paralogs for LOC105378372 Gene

No data available for Paralogs for LOC105378372 Gene

Variants for LOC105378372 Gene

Sequence variations from dbSNP and Humsavar for LOC105378372 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000028841 -- 77,706,202(-) A/G intron_variant
rs1000130288 -- 77,710,886(-) C/G upstream_transcript_variant
rs1001078809 -- 77,709,911(-) C/T intron_variant
rs1001281804 -- 77,711,313(-) C/G upstream_transcript_variant
rs1001428635 -- 77,703,440(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378372 Gene

Disorders for LOC105378372 Gene

No disorders were found for LOC105378372 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378372 Gene

Publications for LOC105378372 Gene

No publications were found for LOC105378372 Gene.

No data available for External Links for LOC105378372 Gene

Products for LOC105378372 Gene

Sources for LOC105378372 Gene

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