Aliases for LOC105378369 Gene

Subcategory (RNA class) for LOC105378369 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105378369 Gene

  • Uncharacterized LOC105378369 3

External Ids for LOC105378369 Gene

Previous GeneCards Identifiers for LOC105378369 Gene

  • GC10U902404

Summaries for LOC105378369 Gene

GeneCards Summary for LOC105378369 Gene

LOC105378369 (Uncharacterized LOC105378369) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378369 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378369 Gene

Genomics for LOC105378369 Gene

GeneHancer (GH) Regulatory Elements for LOC105378369 Gene

Promoters and enhancers for LOC105378369 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J077422 Enhancer 0.9 FANTOM5 Ensembl ENCODE dbSUPER 750.6 +0.1 117 2.6 ZNF24 NR2C2 LOC105378369 lnc-RPS24-20 lnc-DLG5-2 COX6CP15 KCNMA1
GH10J077405 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -16.7 -16683 3.8 SMARCE1 USF2 MYC L3MBTL2 MAX MNT SP7 SMARCA4 EGR1 IKZF1 KCNMA1-AS3 LOC105378369 KCNMA1
GH10J077427 Enhancer 0.6 dbSUPER 0.6 +4.3 4342 0.6 ZNF785 ZNF680 ZNF404 ZNF547 ZBTB8A ZNF639 ZNF629 ZNF140 ZNF580 ZNF623 ENSG00000228748 RPS24 DLG5 LOC105378369 lnc-RPS24-20 COX6CP15 lnc-DLG5-2 KCNMA1
GH10J077390 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -29.9 -29883 6.6 CTCF RAD21 IKZF1 POLR2A REST ZNF512 TRIM22 IKZF2 ZNF143 SP1 KCNMA1 KCNMA1-AS3 KCNMA1-AS2 RNU6-1266P LOC105378369
GH10J077415 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 0.4 -6.1 -6079 3.6 NFIB PKNOX1 POLR2A SP1 FOS NR2F2 GATA3 FOSL2 JUND KCNMA1 LOC105378369 KCNMA1-AS3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378369 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378369 Gene

Genomic Locations for LOC105378369 Gene
chr10:77,422,984-77,432,687
(GRCh38/hg38)
Size:
9,704 bases
Orientation:
Plus strand

Genomic View for LOC105378369 Gene

Genes around LOC105378369 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378369 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378369 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378369 Gene

Proteins for LOC105378369 Gene

Post-translational modifications for LOC105378369 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378369 Gene

Domains & Families for LOC105378369 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378369 Gene

Function for LOC105378369 Gene

Phenotypes From GWAS Catalog for LOC105378369 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378369 Gene

Localization for LOC105378369 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378369 Gene

Pathways & Interactions for LOC105378369 Gene

PathCards logo

SuperPathways for LOC105378369 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378369 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105378369 Gene

Drugs & Compounds for LOC105378369 Gene

No Compound Related Data Available

Transcripts for LOC105378369 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378369 Gene

No ASD Table

Relevant External Links for LOC105378369 Gene

GeneLoc Exon Structure for
LOC105378369

No data available for mRNA/cDNA for LOC105378369 Gene

Expression for LOC105378369 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378369 Gene

Orthologs for LOC105378369 Gene

No data available for Orthologs and Evolution for LOC105378369 Gene

Paralogs for LOC105378369 Gene

No data available for Paralogs for LOC105378369 Gene

Variants for LOC105378369 Gene

Sequence variations from dbSNP and Humsavar for LOC105378369 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000019121 -- 77,420,157(+) G/C genic_upstream_transcript_variant, non_coding_transcript_variant
rs1000489082 -- 77,431,726(+) G/A/C genic_downstream_transcript_variant, intron_variant
rs1000506325 -- 77,425,474(+) C/T intron_variant, non_coding_transcript_variant
rs1000518906 -- 77,424,902(+) C/T non_coding_transcript_variant
rs1000562272 -- 77,431,367(+) A/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378369 Gene

Disorders for LOC105378369 Gene

No disorders were found for LOC105378369 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378369 Gene

Publications for LOC105378369 Gene

No publications were found for LOC105378369 Gene.

No data available for External Links for LOC105378369 Gene

Products for LOC105378369 Gene

Sources for LOC105378369 Gene