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Aliases for LOC105378367 Gene

Subcategory (RNA class) for LOC105378367 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105378367 Gene

  • Uncharacterized LOC105378367 3

External Ids for LOC105378367 Gene

Previous GeneCards Identifiers for LOC105378367 Gene

  • GC10U902319

Summaries for LOC105378367 Gene

GeneCards Summary for LOC105378367 Gene

LOC105378367 (Uncharacterized LOC105378367) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378367 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105378367 Gene

Genomics for LOC105378367 Gene

GeneHancer (GH) Regulatory Elements for LOC105378367 Gene

Promoters and enhancers for LOC105378367 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J075708 Enhancer 0.9 UCNEbase 0.7 -4.0 -4009 0.2 YY1 SP7 PKNOX1 POLR2A KLF7 ZNF561 ZBTB20 OSR2 ZBTB17 ZNF18 GC10P075703 LOC105378367 LRMDA
GH10J075723 Enhancer 1 UCNEbase Ensembl ENCODE 0.4 +11.3 11254 1.2 PKNOX1 POLR2A JUN GC10P075724 GC10M075724 GC10M075713 LOC105378367 LRMDA
GH10J075734 Enhancer 1.2 Ensembl ENCODE 0.3 +21.3 21346 2 ZNF652 ELF3 CEBPG RERE ZNF24 TFE3 SP1 HNF1A PPARG SP5 ENSG00000236842 LRMDA ENSG00000228280 GC10M075724 GC10P075724 LOC105378367
GH10J075710 Enhancer 0.5 UCNEbase 0.7 -2.2 -2181 0.3 PKNOX1 LOC105378367 GC10P075703 LRMDA
GH10J075742 Enhancer 0.8 Ensembl 0.3 +30.7 30746 1.6 ELF3 HMG20B GATAD2A RXRB GABPA KMT2B MNT TCF7 MBD1 ZNF205 ENSG00000228280 ZNF503-AS2 ZNF503 LRMDA ENSG00000236842 LOC105378367 GC10P075790
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378367 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378367 Gene

Genomic Locations for LOC105378367 Gene
chr10:75,712,455-75,743,848
(GRCh38/hg38)
Size:
31,394 bases
Orientation:
Plus strand

Genomic View for LOC105378367 Gene

Genes around LOC105378367 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378367 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378367 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378367 Gene

Proteins for LOC105378367 Gene

Post-translational modifications for LOC105378367 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378367 Gene

Domains & Families for LOC105378367 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105378367 Gene

Function for LOC105378367 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378367 Gene

Localization for LOC105378367 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378367 Gene

Pathways & Interactions for LOC105378367 Gene

PathCards logo

SuperPathways for LOC105378367 Gene

No Data Available

Interacting Proteins for LOC105378367 Gene

Gene Ontology (GO) - Biological Process for LOC105378367 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105378367 Gene

Drugs & Compounds for LOC105378367 Gene

No Compound Related Data Available

Transcripts for LOC105378367 Gene

mRNA/cDNA for LOC105378367 Gene

(3) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378367 Gene

No ASD Table

Relevant External Links for LOC105378367 Gene

GeneLoc Exon Structure for
LOC105378367

Expression for LOC105378367 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378367 Gene

Orthologs for LOC105378367 Gene

No data available for Orthologs and Evolution for LOC105378367 Gene

Paralogs for LOC105378367 Gene

No data available for Paralogs for LOC105378367 Gene

Variants for LOC105378367 Gene

Sequence variations from dbSNP and Humsavar for LOC105378367 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000013154 -- 75,740,597(+) G/A/C intron_variant
rs1000041419 -- 75,733,274(+) C/T intron_variant
rs1000074533 -- 75,735,192(+) G/C/T intron_variant
rs1000078120 -- 75,714,070(+) A/C intron_variant
rs1000139811 -- 75,739,732(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378367 Gene

Disorders for LOC105378367 Gene

No disorders were found for LOC105378367 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378367 Gene

Publications for LOC105378367 Gene

No publications were found for LOC105378367 Gene.

No data available for External Links for LOC105378367 Gene

Products for LOC105378367 Gene

Sources for LOC105378367 Gene

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