Aliases for LOC105378367 Gene

Subcategory (RNA class) for LOC105378367 Gene

lncRNA

Aliases for LOC105378367 Gene

  • Uncharacterized LOC105378367 3

External Ids for LOC105378367 Gene

Previous GeneCards Identifiers for LOC105378367 Gene

  • GC10U902319

Summaries for LOC105378367 Gene

GeneCards Summary for LOC105378367 Gene

LOC105378367 (Uncharacterized LOC105378367) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105378367 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378367 Gene

Genomics for LOC105378367 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378367 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J075711 Enhancer 0.4 CraniofacialAtlas 600.7 -0.3 -312 0.6 POLR2A USF1 PKNOX1 ENSG00000228280 LOC105378367 HSALNG0078987 LRMDA
GH10J075708 Enhancer 1 UCNEbase Ensembl 0.7 -4.0 -3954 2.6 ZNF692 ZSCAN4 POLR2A ZNF561 ZBTB20 RAD21 KLF7 OSR2 ZBTB17 ZFP69B ENSG00000228280 HSALNG0078987 LOC105378367 LRMDA
GH10J075734 Enhancer 1.1 Ensembl ENCODE 0.4 +21.2 21246 2.2 HNRNPL CREB1 GATAD2A TFE3 SOX13 NFKBIZ RCOR2 FOXA1 RXRB IRF2 ENSG00000236842 LRMDA piR-54764-062 LOC105378367 ENSG00000228280
GH10J075703 Enhancer 0.8 UCNEbase 0.4 -8.7 -8663 0.3 ZNF174 ARNT FOXA1 TARDBP OSR2 ZBTB17 FOXM1 ZNF18 ZNF843 FEZF1 HSALNG0078987 KAT6B ENSG00000236842 LRMDA ENSG00000228280 LOC105378367
GH10J075723 Enhancer 0.9 UCNEbase Ensembl ENCODE 0.4 +11.5 11546 2 POLR2A JUN PKNOX1 ZNF503 ZNF503-AS2 ENSG00000236842 LRMDA ENSG00000228280 LOC105378367 piR-54764-062
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378367 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378367 Gene

Genomic Locations for LOC105378367 Gene
chr10:75,712,455-75,743,848
(GRCh38/hg38)
Size:
31,394 bases
Orientation:
Plus strand

Genomic View for LOC105378367 Gene

Genes around LOC105378367 on UCSC Golden Path with GeneCards custom track
LOC105378367 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105378367 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378367 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378367 Gene

Proteins for LOC105378367 Gene

Post-translational modifications for LOC105378367 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378367 Gene

Domains & Families for LOC105378367 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378367 Gene

Function for LOC105378367 Gene

Phenotypes From GWAS Catalog for LOC105378367 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378367 Gene

Localization for LOC105378367 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378367 Gene

Pathways & Interactions for LOC105378367 Gene

PathCards logo

SuperPathways for LOC105378367 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378367 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378367 Gene

Drugs & Compounds for LOC105378367 Gene

No Compound Related Data Available

Transcripts for LOC105378367 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC105378367 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00008E39CB_9606 lncRNA 922 1

RefSeq: NR_132791,

LOC105378367 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC105378367 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378367 Gene

No ASD Table

Relevant External Links for LOC105378367 Gene

GeneLoc Exon Structure for
LOC105378367

Expression for LOC105378367 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC105378367

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378367 Gene

Orthologs for LOC105378367 Gene

No data available for Orthologs and Evolution for LOC105378367 Gene

Paralogs for LOC105378367 Gene

No data available for Paralogs for LOC105378367 Gene

Variants for LOC105378367 Gene

Additional dbSNP identifiers (rs#s) for LOC105378367 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378367 Gene

Disorders for LOC105378367 Gene

No disorders were found for LOC105378367 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378367 Gene

Publications for LOC105378367 Gene

No publications were found for LOC105378367 Gene.

No data available for Mastermind for LOC105378367 Gene

Products for LOC105378367 Gene

Sources for LOC105378367 Gene