Aliases for LOC105378355 Gene

Data sources for LOC105378355 Gene:

RNA type for LOC105378355 Gene

ncRNA

Aliases for LOC105378355 Gene

External Ids for LOC105378355 Gene

Previous GeneCards Identifiers for LOC105378355 Gene

  • GC10U902427

Summaries for LOC105378355 Gene

GeneCards Summary for LOC105378355 Gene

LOC105378355 (Uncharacterized LOC105378355) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378355 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378355 Gene

Genomics for LOC105378355 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378355 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J071554 Enhancer 0.5 Ensembl 250.7 -0.9 -859 1 SPI1 ZNF143 ZMYM3 KDM1A BCOR SMARCA5 MGA HSALNG0078714 LOC105378355 CDH23-AS1 SLC29A3 CDH23 HSALNG0078715 C10orf105
GH10J071552 Enhancer 0.2 Ensembl 250.7 +1.3 1341 0.2 HSALNG0078714 LOC105378355 CDH23-AS1 CDH23 SLC29A3 lnc-SLC29A3-3 C10orf105
GH10J071550 Enhancer 0.6 Ensembl ENCODE 0.7 +2.9 2941 1.4 REST ZNF398 KDM1A ZNF24 CDH23-AS1 CDH23 HSALNG0078714 LOC105378355 lnc-SLC29A3-3 C10orf105
GH10J071578 Enhancer 0.8 dbSUPER 0.3 -27.2 -27198 5.5 NCOR1 NFIC YY1 REST KLF11 RXRA TAL1 RARA ZNF316 ZSCAN9 CDH23 CDH23-AS1 SLC29A3 C10orf105 HSALNG0078715 LOC105378355
GH10J071570 Enhancer 0.7 ENCODE 0.4 -16.0 -15957 0.2 BCLAF1 ZNF654 CTCF REST TRIM22 NR2C1 RAD21 SMC3 NR2F1 NR2F6 SLC29A3 CDH23-AS1 LOC105378355 HSALNG0078715 C10orf105 CDH23
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378355 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378355 Gene

Latest Assembly
chr10:71,551,050-71,554,242
(GRCh38/hg38)
Size:
3,193 bases
Orientation:
Minus strand

Genomic View for LOC105378355 Gene

Genes around LOC105378355 on UCSC Golden Path with GeneCards custom track
LOC105378355 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105378355 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378355 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378355 Gene

Proteins for LOC105378355 Gene

Post-translational modifications for LOC105378355 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378355 Gene

Domains & Families for LOC105378355 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378355 Gene

Function for LOC105378355 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378355 Gene

Localization for LOC105378355 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378355 Gene

Pathways & Interactions for LOC105378355 Gene

PathCards logo

SuperPathways for LOC105378355 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378355 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378355 Gene

Drugs & Compounds for LOC105378355 Gene

No Compound Related Data Available

Transcripts for LOC105378355 Gene

LOC105378355 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378355 Gene

No ASD Table

Relevant External Links for LOC105378355 Gene

GeneLoc Exon Structure for
LOC105378355

No data available for mRNA/cDNA for LOC105378355 Gene

Expression for LOC105378355 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378355 Gene

Orthologs for LOC105378355 Gene

No data available for Orthologs and Evolution for LOC105378355 Gene

Paralogs for LOC105378355 Gene

No data available for Paralogs for LOC105378355 Gene

Variants for LOC105378355 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105378355 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378355 Gene

Disorders for LOC105378355 Gene

No disorders were found for LOC105378355 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378355 Gene

Publications for LOC105378355 Gene

No publications were found for LOC105378355 Gene.

No data available for Mastermind for LOC105378355 Gene

Products for LOC105378355 Gene

Sources for LOC105378355 Gene