Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105378350 Gene

Subcategory (RNA class) for LOC105378350 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105378350 Gene

  • Uncharacterized LOC105378350 3

External Ids for LOC105378350 Gene

Previous GeneCards Identifiers for LOC105378350 Gene

  • GC10U902122

Summaries for LOC105378350 Gene

GeneCards Summary for LOC105378350 Gene

LOC105378350 (Uncharacterized LOC105378350) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378350 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105378350 Gene

Genomics for LOC105378350 Gene

GeneHancer (GH) Regulatory Elements for LOC105378350 Gene

Promoters and enhancers for LOC105378350 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I070981 Enhancer 0.6 ENCODE 0.8 +4.1 4135 1.4 IRF2 ZNF687 BHLHE40 USF2 MITF IKZF1 ZFP36 BCLAF1 RUNX3 SPI1 LOC105378350 LOC105378351
GH10I070984 Enhancer 0.7 ENCODE 0.4 +7.9 7940 2.8 KLF1 KLF17 MAX ZBTB40 GATA3 ZNF766 SCRT2 ZNF639 SCRT1 ZNF687 SLC29A3 LOC105378350 LOC105378351
GH10I070941 Enhancer 0.5 ENCODE 0.3 -37.0 -37013 0.1 NFIC NFIB MYNN NRF1 UNC5B LOC105378349 LOC105378350
GH10I070970 Enhancer 0.3 ENCODE 0.4 -7.3 -7286 0.2 SP1 PCBD1 UNC5B LOC105378350 LOC105378349
GH10I070950 Enhancer 0.4 ENCODE 0.3 -26.7 -26686 2.6 ZFP36 EBF1 REST LOC105378349 LOC105378350
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105378350 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378350 Gene

Genomic Locations for LOC105378350 Gene
chr10:70,978,335-70,999,102
(GRCh38/hg38)
Size:
20,768 bases
Orientation:
Plus strand

Genomic View for LOC105378350 Gene

Genes around LOC105378350 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378350 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378350 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378350 Gene

Proteins for LOC105378350 Gene

Post-translational modifications for LOC105378350 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378350 Gene

Domains & Families for LOC105378350 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105378350 Gene

Function for LOC105378350 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378350 Gene

Localization for LOC105378350 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378350 Gene

Pathways & Interactions for LOC105378350 Gene

SuperPathways for LOC105378350 Gene

No Data Available

Interacting Proteins for LOC105378350 Gene

Gene Ontology (GO) - Biological Process for LOC105378350 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105378350 Gene

Drugs & Compounds for LOC105378350 Gene

No Compound Related Data Available

Transcripts for LOC105378350 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378350 Gene

No ASD Table

Relevant External Links for LOC105378350 Gene

GeneLoc Exon Structure for
LOC105378350

No data available for mRNA/cDNA for LOC105378350 Gene

Expression for LOC105378350 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378350 Gene

Orthologs for LOC105378350 Gene

No data available for Orthologs and Evolution for LOC105378350 Gene

Paralogs for LOC105378350 Gene

No data available for Paralogs for LOC105378350 Gene

Variants for LOC105378350 Gene

Sequence variations from dbSNP and Humsavar for LOC105378350 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000197159 -- 70,990,065(+) C/T intron_variant
rs1000315235 -- 70,993,255(+) C/T intron_variant
rs1000571169 -- 70,983,165(+) C/G intron_variant
rs1000573705 -- 70,996,322(+) G/T intron_variant
rs1000586459 -- 70,977,896(+) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378350 Gene

Disorders for LOC105378350 Gene

No disorders were found for LOC105378350 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378350 Gene

Publications for LOC105378350 Gene

No publications were found for LOC105378350 Gene.

Products for LOC105378350 Gene

Sources for LOC105378350 Gene

Content
Loading form....