Aliases for LOC105378289 Gene

Subcategory (RNA class) for LOC105378289 Gene

ncRNA

Aliases for LOC105378289 Gene

  • Uncharacterized LOC105378289 3

External Ids for LOC105378289 Gene

Previous GeneCards Identifiers for LOC105378289 Gene

  • GC10U902050

Summaries for LOC105378289 Gene

GeneCards Summary for LOC105378289 Gene

LOC105378289 (Uncharacterized LOC105378289) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378289 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378289 Gene

Genomics for LOC105378289 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378289 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J046596 Promoter/Enhancer 1.9 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -1.2 -1226 2.1 RNF2 ARHGAP35 GATAD2A CTCF TEAD4 YBX1 PRDM10 ZNF629 ZNF512 IKZF1 ENSG00000229227 ENSG00000231187 LOC101927699 LOC105378289 MN296979 WASHC2C AGAP4 PARGP1 SYT15 PTPN20
GH10J046602 Enhancer 0.3 Ensembl 0.7 +3.5 3507 0.4 FOXA2 SYT15 ENSG00000229227 LOC105378289 piR-51605-001 PTPN20
GH10J046610 Enhancer 0.2 Ensembl 0.4 +12.0 12007 1.4 piR-51605-001 ENSG00000229227 LOC105378289 SYT15 SHLD2P1 PTPN20
GH10J046614 Enhancer 0.2 Ensembl 0.4 +15.4 15407 0.2 piR-51605-001 LOC105378289 SHLD2P1 SYT15 PTPN20
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378289 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378289 Gene

Genomic Locations for LOC105378289 Gene
chr10:46,598,894-46,612,154
(GRCh38/hg38)
Size:
13,261 bases
Orientation:
Plus strand

Genomic View for LOC105378289 Gene

Genes around LOC105378289 on UCSC Golden Path with GeneCards custom track
LOC105378289 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105378289 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378289 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378289 Gene

Proteins for LOC105378289 Gene

Post-translational modifications for LOC105378289 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378289 Gene

Domains & Families for LOC105378289 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378289 Gene

Function for LOC105378289 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378289 Gene

Localization for LOC105378289 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378289 Gene

Pathways & Interactions for LOC105378289 Gene

PathCards logo

SuperPathways for LOC105378289 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378289 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378289 Gene

Drugs & Compounds for LOC105378289 Gene

No Compound Related Data Available

Transcripts for LOC105378289 Gene

LOC105378289 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378289 Gene

No ASD Table

Relevant External Links for LOC105378289 Gene

GeneLoc Exon Structure for
LOC105378289

No data available for mRNA/cDNA for LOC105378289 Gene

Expression for LOC105378289 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378289 Gene

Orthologs for LOC105378289 Gene

No data available for Orthologs and Evolution for LOC105378289 Gene

Paralogs for LOC105378289 Gene

No data available for Paralogs for LOC105378289 Gene

Variants for LOC105378289 Gene

Additional dbSNP identifiers (rs#s) for LOC105378289 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378289 Gene

Disorders for LOC105378289 Gene

No disorders were found for LOC105378289 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378289 Gene

Publications for LOC105378289 Gene

No publications were found for LOC105378289 Gene.

No data available for Mastermind for LOC105378289 Gene

Products for LOC105378289 Gene

Sources for LOC105378289 Gene