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Aliases for LOC105378286 Gene

Subcategory (RNA class) for LOC105378286 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105378286 Gene

  • Uncharacterized LOC105378286 3

External Ids for LOC105378286 Gene

Previous GeneCards Identifiers for LOC105378286 Gene

  • GC10U901988

Summaries for LOC105378286 Gene

GeneCards Summary for LOC105378286 Gene

LOC105378286 (Uncharacterized LOC105378286) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378286 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105378286 Gene

Genomics for LOC105378286 Gene

GeneHancer (GH) Regulatory Elements for LOC105378286 Gene

Promoters and enhancers for LOC105378286 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J045459 Promoter/Enhancer 1.4 Ensembl ENCODE 600.7 -1.8 -1778 6.7 SP1 CC2D1A CTCF GTF2F1 ZNF687 RELA CREM MLLT1 RAD21 IKZF1 LOC105378286 MARCH8 AGAP4 ZFAND4 PARGP1 WASHC2C GC10M045536
GH10J045468 Enhancer 1.3 Ensembl ENCODE 0.4 +6.3 6289 4.9 MTA3 CC2D1A SP1 ZFX ELF3 ZKSCAN8 CBFA2T2 ZNF148 MLLT1 CEBPG MARCH8 PARGP1 WASHC2C ENSG00000273363 AGAP4 LOC105378286 GC10P045511
GH10J045502 Enhancer 1 Ensembl ENCODE 0.3 +38.4 38447 1 ELF3 KAT8 CEBPA GATAD2A RXRB FOXK2 SOX13 FOXA1 FOXA2 SAP130 MARCH8 GC10P045511 LOC105378286
GH10J045466 Enhancer 0.3 ENCODE 0.7 +2.8 2773 0.2 POLR2A LOC105378286 GC10P045511 MARCH8
GH10J045497 Enhancer 0.4 Ensembl 0.3 +34.0 34026 1 CEBPG CEBPB MARCH8 WASHC2C GC10P045511 LOC105378286
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378286 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378286 Gene

Genomic Locations for LOC105378286 Gene
chr10:45,464,275-45,511,565
(GRCh38/hg38)
Size:
47,291 bases
Orientation:
Plus strand

Genomic View for LOC105378286 Gene

Genes around LOC105378286 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378286 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378286 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378286 Gene

Proteins for LOC105378286 Gene

Post-translational modifications for LOC105378286 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378286 Gene

Domains & Families for LOC105378286 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105378286 Gene

Function for LOC105378286 Gene

Phenotypes From GWAS Catalog for LOC105378286 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378286 Gene

Localization for LOC105378286 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378286 Gene

Pathways & Interactions for LOC105378286 Gene

PathCards logo

SuperPathways for LOC105378286 Gene

No Data Available

Interacting Proteins for LOC105378286 Gene

Gene Ontology (GO) - Biological Process for LOC105378286 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105378286 Gene

Drugs & Compounds for LOC105378286 Gene

No Compound Related Data Available

Transcripts for LOC105378286 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378286 Gene

No ASD Table

Relevant External Links for LOC105378286 Gene

GeneLoc Exon Structure for
LOC105378286

No data available for mRNA/cDNA for LOC105378286 Gene

Expression for LOC105378286 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378286 Gene

Orthologs for LOC105378286 Gene

No data available for Orthologs and Evolution for LOC105378286 Gene

Paralogs for LOC105378286 Gene

No data available for Paralogs for LOC105378286 Gene

Variants for LOC105378286 Gene

Sequence variations from dbSNP and Humsavar for LOC105378286 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000107217 -- 45,473,765(+) C/G intron_variant
rs1000126166 -- 45,492,952(+) A/G intron_variant
rs1000176506 -- 45,475,255(+) C/A/T intron_variant
rs1000263736 -- 45,471,902(+) C/A intron_variant
rs1000364619 -- 45,486,949(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378286 Gene

Disorders for LOC105378286 Gene

No disorders were found for LOC105378286 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378286 Gene

Publications for LOC105378286 Gene

No publications were found for LOC105378286 Gene.

No data available for External Links for LOC105378286 Gene

Products for LOC105378286 Gene

Sources for LOC105378286 Gene

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