Aliases for LOC105378281 Gene

Data sources for LOC105378281 Gene:

Subcategory (RNA class) for LOC105378281 Gene

ncRNA

Aliases for LOC105378281 Gene

External Ids for LOC105378281 Gene

Previous GeneCards Identifiers for LOC105378281 Gene

  • GC10U901979

Summaries for LOC105378281 Gene

GeneCards Summary for LOC105378281 Gene

LOC105378281 (Uncharacterized LOC105378281) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378281 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378281 Gene

Genomics for LOC105378281 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378281 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J044969 Enhancer 0.3 ENCODE dbSUPER 250.7 +1.5 1461 0.2 HSALNG0077641 LOC105378281 ENSG00000223462 ZNF22 ZNF22-AS1 TMEM72 DEPP1 RASSF4 TMEM72-AS1
GH10J044957 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +7.7 7693 12.3 CHD2 ZBTB10 MXD4 NR2C1 POLR2A ELF1 CTCF MCM7 MCM3 ZIC2 TMEM72-AS1 RASSF4 WASHC2C ZNF22 AGAP4 ZNF22-AS1 ENSG00000223462 ENSG00000234504 TMEM72 CEP164P1
GH10J044971 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -8.3 -8334 16.9 CHD2 TBP SP1 BCL11A MXD4 FEZF1 CEBPA IKZF1 SMAD5 MBD2 DEPP1 lnc-DEPP1-3 piR-55012 ZNF22-AS1 ZNF22 TMEM72-AS1 RASSF4 PARGP1 ENSG00000223462 WASHC2C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378281 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378281 Gene

Latest Assembly
chr10:44,969,111-44,971,509
(GRCh38/hg38)
Size:
2,399 bases
Orientation:
Minus strand

Genomic View for LOC105378281 Gene

Genes around LOC105378281 on UCSC Golden Path with GeneCards custom track
LOC105378281 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105378281 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378281 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378281 Gene

Proteins for LOC105378281 Gene

Post-translational modifications for LOC105378281 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378281 Gene

Domains & Families for LOC105378281 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378281 Gene

Function for LOC105378281 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378281 Gene

Localization for LOC105378281 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378281 Gene

Pathways & Interactions for LOC105378281 Gene

PathCards logo

SuperPathways for LOC105378281 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378281 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378281 Gene

Drugs & Compounds for LOC105378281 Gene

No Compound Related Data Available

Transcripts for LOC105378281 Gene

LOC105378281 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378281 Gene

No ASD Table

Relevant External Links for LOC105378281 Gene

GeneLoc Exon Structure for
LOC105378281

No data available for mRNA/cDNA for LOC105378281 Gene

Expression for LOC105378281 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378281 Gene

Orthologs for LOC105378281 Gene

No data available for Orthologs and Evolution for LOC105378281 Gene

Paralogs for LOC105378281 Gene

No data available for Paralogs for LOC105378281 Gene

Variants for LOC105378281 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105378281 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378281 Gene

Disorders for LOC105378281 Gene

No disorders were found for LOC105378281 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378281 Gene

Publications for LOC105378281 Gene

No publications were found for LOC105378281 Gene.

No data available for Mastermind for LOC105378281 Gene

Products for LOC105378281 Gene

Sources for LOC105378281 Gene