Aliases for LOC105378275 Gene

Subcategory (RNA class) for LOC105378275 Gene

ncRNA

Aliases for LOC105378275 Gene

  • Uncharacterized LOC105378275 3

External Ids for LOC105378275 Gene

Previous GeneCards Identifiers for LOC105378275 Gene

  • GC10U902381

Summaries for LOC105378275 Gene

GeneCards Summary for LOC105378275 Gene

LOC105378275 (Uncharacterized LOC105378275) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378275 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378275 Gene

Genomics for LOC105378275 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378275 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J043778 Promoter/Enhancer 0.7 EPDnew Ensembl 600.7 +0.2 153 1 FOXA1 ESR1 GATA3 LINC02658 LINC00619 LINC00840 LOC105378275 LINC02659 HNRNPA3P1 LOC107984189 ZNF32
GH10J043780 Enhancer 0.2 Ensembl 600.7 +2.0 1954 0.6 LINC02658 LINC00619 LINC00840 LOC105378275 LINC02659 HNRNPA3P1 LOC107984189 ZNF32
GH10J043781 Enhancer 0.7 Ensembl ENCODE 0.7 +3.1 3054 1.2 ZIC2 DPF2 ZFHX2 RCOR1 FEZF1 GLIS1 MYC MAX EGR2 LINC00619 LINC00840 LOC105378275 HNRNPA3P1 LOC107984189 ZNF32
GH10J043793 Enhancer 0.8 FANTOM5 Ensembl ENCODE 0.4 +15.3 15312 1.3 SP1 CEBPB NR2C2 GABPA NR2F2 RXRA MN309162 LINC00619 LINC00840 LOC105378275 HSALNG0077588 LOC107984189 ZNF32
GH10J043808 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 0.3 +29.5 29523 3.1 RUNX3 FOS BHLHE40 FEZF1 MN309162 HSALNG0077588 LOC107984189 LOC105378275 LINC00619 LINC00840 ZNF32
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378275 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378275 Gene

Genomic Locations for LOC105378275 Gene
chr10:43,778,947-43,818,744
(GRCh38/hg38)
Size:
39,798 bases
Orientation:
Plus strand

Genomic View for LOC105378275 Gene

Genes around LOC105378275 on UCSC Golden Path with GeneCards custom track
LOC105378275 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105378275 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378275 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378275 Gene

Proteins for LOC105378275 Gene

Post-translational modifications for LOC105378275 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378275 Gene

Domains & Families for LOC105378275 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378275 Gene

Function for LOC105378275 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378275 Gene

Localization for LOC105378275 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378275 Gene

Pathways & Interactions for LOC105378275 Gene

PathCards logo

SuperPathways for LOC105378275 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378275 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378275 Gene

Drugs & Compounds for LOC105378275 Gene

No Compound Related Data Available

Transcripts for LOC105378275 Gene

LOC105378275 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378275 Gene

No ASD Table

Relevant External Links for LOC105378275 Gene

GeneLoc Exon Structure for
LOC105378275

No data available for mRNA/cDNA for LOC105378275 Gene

Expression for LOC105378275 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378275 Gene

Orthologs for LOC105378275 Gene

No data available for Orthologs and Evolution for LOC105378275 Gene

Paralogs for LOC105378275 Gene

No data available for Paralogs for LOC105378275 Gene

Variants for LOC105378275 Gene

Additional dbSNP identifiers (rs#s) for LOC105378275 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378275 Gene

Disorders for LOC105378275 Gene

No disorders were found for LOC105378275 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378275 Gene

Publications for LOC105378275 Gene

No publications were found for LOC105378275 Gene.

No data available for Mastermind for LOC105378275 Gene

Products for LOC105378275 Gene

Sources for LOC105378275 Gene