Aliases for LOC105378085 Gene

Subcategory (RNA class) for LOC105378085 Gene

ncRNA

Aliases for LOC105378085 Gene

  • Uncharacterized LOC105378085 3

External Ids for LOC105378085 Gene

Previous GeneCards Identifiers for LOC105378085 Gene

  • GC06U902906
  • GC06M159589
  • GC06M159595
  • GC06M159593

Summaries for LOC105378085 Gene

GeneCards Summary for LOC105378085 Gene

LOC105378085 (Uncharacterized LOC105378085) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378085 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378085 Gene

Genomics for LOC105378085 Gene

GeneHancer (GH) Regulatory Elements for LOC105378085 Gene

Promoters and enhancers for LOC105378085 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J159593 Enhancer 0.9 Ensembl ENCODE 500.7 +0.2 201 2.8 FOS ZNF316 MAFF GABPA REST FOSL2 MAFK JUND STAT3 FOXP2 LOC105378085 MRPL18 PNLDC1 LOC729603 ENSG00000237927 ENSG00000286533
GH06J159591 Enhancer 0.2 Ensembl 0.7 +3.5 3501 0.2 ENSG00000237927 LOC105378085 ENSG00000286533
GH06J159592 Enhancer 0.2 Ensembl 0.7 +2.7 2701 0.2 MRPL18 ENSG00000237927 LOC105378085 ENSG00000286533
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378085 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378085 Gene

Genomic Locations for LOC105378085 Gene
chr6:159,586,953-159,595,202
(GRCh38/hg38)
Size:
8,250 bases
Orientation:
Minus strand

Genomic View for LOC105378085 Gene

Genes around LOC105378085 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378085 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378085 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378085 Gene

Proteins for LOC105378085 Gene

Post-translational modifications for LOC105378085 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378085 Gene

Domains & Families for LOC105378085 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378085 Gene

Function for LOC105378085 Gene

Phenotypes for LOC105378085 Gene

GenomeRNAi human phenotypes for LOC105378085:
genes like me logo Genes that share phenotypes with LOC105378085: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378085 Gene

Localization for LOC105378085 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378085 Gene

Pathways & Interactions for LOC105378085 Gene

PathCards logo

SuperPathways for LOC105378085 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105378085 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378085 Gene

Drugs & Compounds for LOC105378085 Gene

No Compound Related Data Available

Transcripts for LOC105378085 Gene

mRNA/cDNA for LOC105378085 Gene

1 REFSEQ mRNAs :
3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378085 Gene

No ASD Table

Relevant External Links for LOC105378085 Gene

GeneLoc Exon Structure for
LOC105378085

Expression for LOC105378085 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC105378085

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378085 Gene

Orthologs for LOC105378085 Gene

No data available for Orthologs and Evolution for LOC105378085 Gene

Paralogs for LOC105378085 Gene

No data available for Paralogs for LOC105378085 Gene

Variants for LOC105378085 Gene

Additional dbSNP identifiers (rs#s) for LOC105378085 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378085 Gene

Disorders for LOC105378085 Gene

No disorders were found for LOC105378085 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378085 Gene

Publications for LOC105378085 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 54

No data available for Mastermind for LOC105378085 Gene

Products for LOC105378085 Gene

Sources for LOC105378085 Gene