Aliases for LOC105378077 Gene

Subcategory (RNA class) for LOC105378077 Gene

ncRNA

Aliases for LOC105378077 Gene

  • Uncharacterized LOC105378077 3

External Ids for LOC105378077 Gene

Previous GeneCards Identifiers for LOC105378077 Gene

  • GC06U902952

Summaries for LOC105378077 Gene

GeneCards Summary for LOC105378077 Gene

LOC105378077 (Uncharacterized LOC105378077) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378077 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378077 Gene

Genomics for LOC105378077 Gene

GeneHancer (GH) Regulatory Elements for LOC105378077 Gene

Promoters and enhancers for LOC105378077 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J157556 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 500.7 -1.0 -1030 4.8 EP300 REST AFF1 RELA MEF2C RCOR1 TRIM22 NFYB FOXA2 MIER1 LOC105378077 ZDHHC14 SYNJ2 MIR3692
GH06J157560 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +4.4 4354 3.6 SP1 EP300 RELA RAD21 TRIM22 NFYB BCL11A TCF12 CBFB ZNF384 LOC105378077 lnc-TMEM242-6 ZDHHC14
GH06J157526 Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -24.6 -24630 16 EP300 FOXK2 ZBTB40 POLR2G NCOR1 JUND FOS TEAD4 ZNF639 ZNF10 ARID1B ENSG00000271551 ENSG00000271265 LOC100420839 ZDHHC14 MIR3692 LOC105378077
GH06J157569 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +12.4 12369 3.6 EP300 AFF1 RELA MEF2C RCOR1 TRIM22 BCL11A TCF12 FOXA2 CBFB LOC105378077 lnc-TMEM242-6 ZDHHC14
GH06J157577 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +21.8 21770 3.2 ZSCAN5C RBAK TSC22D4 CEBPB FOSL1 JUND EP300 PRDM10 GATA2 ATF2 RNU6-786P SYNJ2 lnc-TMEM242-6 LOC105378077 ZDHHC14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378077 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378077 Gene

Genomic Locations for LOC105378077 Gene
chr6:157,558,231-157,561,455
(GRCh38/hg38)
Size:
3,225 bases
Orientation:
Plus strand

Genomic View for LOC105378077 Gene

Genes around LOC105378077 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378077 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378077 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378077 Gene

Proteins for LOC105378077 Gene

Post-translational modifications for LOC105378077 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378077 Gene

Domains & Families for LOC105378077 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378077 Gene

Function for LOC105378077 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378077 Gene

Localization for LOC105378077 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378077 Gene

Pathways & Interactions for LOC105378077 Gene

PathCards logo

SuperPathways for LOC105378077 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105378077 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378077 Gene

Drugs & Compounds for LOC105378077 Gene

No Compound Related Data Available

Transcripts for LOC105378077 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378077 Gene

No ASD Table

Relevant External Links for LOC105378077 Gene

GeneLoc Exon Structure for
LOC105378077

No data available for mRNA/cDNA for LOC105378077 Gene

Expression for LOC105378077 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378077 Gene

Orthologs for LOC105378077 Gene

No data available for Orthologs and Evolution for LOC105378077 Gene

Paralogs for LOC105378077 Gene

No data available for Paralogs for LOC105378077 Gene

Variants for LOC105378077 Gene

Additional dbSNP identifiers (rs#s) for LOC105378077 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378077 Gene

Disorders for LOC105378077 Gene

No disorders were found for LOC105378077 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378077 Gene

Publications for LOC105378077 Gene

No publications were found for LOC105378077 Gene.

No data available for Mastermind for LOC105378077 Gene

Products for LOC105378077 Gene

Sources for LOC105378077 Gene