Aliases for LOC105378072 Gene

Subcategory (RNA class) for LOC105378072 Gene

ncRNA

Aliases for LOC105378072 Gene

  • Uncharacterized LOC105378072 3

External Ids for LOC105378072 Gene

Previous GeneCards Identifiers for LOC105378072 Gene

  • GC06U902911

Summaries for LOC105378072 Gene

GeneCards Summary for LOC105378072 Gene

LOC105378072 (Uncharacterized LOC105378072) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378072 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378072 Gene

Genomics for LOC105378072 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378072 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J155791 Enhancer 0.2 Ensembl 600.7 -1.8 -1840 0.2 LOC105378072 LOC105378069 NOX3 ARID1B
GH06J155781 Enhancer 0.8 Ensembl ENCODE 0.4 -10.8 -10781 3.1 SP1 JUND CEBPB ESR1 FOS FOSL2 MAFK CTCF JUN TRIM28 LOC105378072 LOC105378069 NOX3 ARID1B
GH06J155764 Enhancer 0.7 Ensembl ENCODE 0.3 -27.6 -27570 2.1 CREB1 REST CTCF JUND CEBPB FOS RAD21 JUN LOC105378072 LOC105378069 NOX3
GH06J155736 Enhancer 0.7 ENCODE 0.2 -56.3 -56279 0.2 JUND PKNOX1 DPF2 SOX6 TCF12 EP300 NFE2 ZNF316 TRIM24 NCOR1 LOC105378069 LOC105378072 NOX3
GH06J155882 Enhancer 0.8 Ensembl ENCODE 0.2 +89.2 89160 4.2 IKZF2 PKNOX1 ARID3A DPF2 RELB CEBPB RUNX3 JUN ELF1 NBN RNU7-152P lnc-CLDN20-2 MIR1202 LOC105378072 LOC101928923 NOX3 ARID1B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378072 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378072 Gene

Genomic Locations for LOC105378072 Gene
chr6:155,793,341-155,891,283
(GRCh38/hg38)
Size:
97,943 bases
Orientation:
Plus strand

Genomic View for LOC105378072 Gene

Genes around LOC105378072 on UCSC Golden Path with GeneCards custom track
LOC105378072 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105378072 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378072 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378072 Gene

Proteins for LOC105378072 Gene

Post-translational modifications for LOC105378072 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378072 Gene

Domains & Families for LOC105378072 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378072 Gene

Function for LOC105378072 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378072 Gene

Localization for LOC105378072 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378072 Gene

Pathways & Interactions for LOC105378072 Gene

PathCards logo

SuperPathways for LOC105378072 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378072 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378072 Gene

Drugs & Compounds for LOC105378072 Gene

No Compound Related Data Available

Transcripts for LOC105378072 Gene

LOC105378072 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378072 Gene

No ASD Table

Relevant External Links for LOC105378072 Gene

GeneLoc Exon Structure for
LOC105378072

No data available for mRNA/cDNA for LOC105378072 Gene

Expression for LOC105378072 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378072 Gene

Orthologs for LOC105378072 Gene

No data available for Orthologs and Evolution for LOC105378072 Gene

Paralogs for LOC105378072 Gene

No data available for Paralogs for LOC105378072 Gene

Variants for LOC105378072 Gene

Additional dbSNP identifiers (rs#s) for LOC105378072 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378072 Gene

Disorders for LOC105378072 Gene

No disorders were found for LOC105378072 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378072 Gene

Publications for LOC105378072 Gene

No publications were found for LOC105378072 Gene.

No data available for Mastermind for LOC105378072 Gene

Products for LOC105378072 Gene

Sources for LOC105378072 Gene