Aliases for LOC105378021 Gene

Subcategory (RNA class) for LOC105378021 Gene

ncRNA

Aliases for LOC105378021 Gene

  • Uncharacterized LOC105378021 3

External Ids for LOC105378021 Gene

Previous GeneCards Identifiers for LOC105378021 Gene

  • GC06U903011

Summaries for LOC105378021 Gene

GeneCards Summary for LOC105378021 Gene

LOC105378021 (Uncharacterized LOC105378021) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378021 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378021 Gene

Genomics for LOC105378021 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105378021 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J138029 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +1.4 1387 7 CREB1 ZNF629 ZNF692 ZNF239 ZNF639 TCF7L2 RFX1 ZNF524 CTBP1 ZNF444 LOC105378021 PERP HSALNG0053807 TNFAIP3
GH06J138037 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.7 -2.3 -2347 0.4 ATF7 ZNF629 ZNF692 ZNF239 ZNF639 TCF7L2 ZSCAN5C OSR2 CREB1 ZBTB17 LOC105378021 piR-32325-178 PERP TNFAIP3
GH06J138028 Enhancer 1 FANTOM5 ENCODE dbSUPER 0.4 +5.8 5841 0.8 ZNF512 ZNF512B RFX1 CTBP1 ZNF444 ZNF592 KLF4 ZNF217 DPF2 NFIB PERP HSALNG0053807 LOC105378021 TNFAIP3
GH06J138043 Enhancer 0.3 ENCODE dbSUPER 0.4 -9.6 -9603 1 PERP piR-32325-178 LOC105378021 TNFAIP3
GH06J138016 Enhancer 0.3 Ensembl 0.4 +17.6 17564 1 FOXA2 IKZF1 HSALNG0053806 HSALNG0053807 LOC105378021 hsa-miR-5095-437 PERP TNFAIP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378021 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105378021 Gene

Genomic Locations for LOC105378021 Gene
chr6:138,015,546-138,034,865
(GRCh38/hg38)
Size:
19,320 bases
Orientation:
Minus strand

Genomic View for LOC105378021 Gene

Genes around LOC105378021 on UCSC Golden Path with GeneCards custom track
LOC105378021 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105378021 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378021 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378021 Gene

Proteins for LOC105378021 Gene

Post-translational modifications for LOC105378021 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378021 Gene

Domains & Families for LOC105378021 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378021 Gene

Function for LOC105378021 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378021 Gene

Localization for LOC105378021 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378021 Gene

Pathways & Interactions for LOC105378021 Gene

PathCards logo

SuperPathways for LOC105378021 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105378021 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378021 Gene

Drugs & Compounds for LOC105378021 Gene

No Compound Related Data Available

Transcripts for LOC105378021 Gene

LOC105378021 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378021 Gene

No ASD Table

Relevant External Links for LOC105378021 Gene

GeneLoc Exon Structure for
LOC105378021

No data available for mRNA/cDNA for LOC105378021 Gene

Expression for LOC105378021 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378021 Gene

Orthologs for LOC105378021 Gene

No data available for Orthologs and Evolution for LOC105378021 Gene

Paralogs for LOC105378021 Gene

No data available for Paralogs for LOC105378021 Gene

Variants for LOC105378021 Gene

Additional dbSNP identifiers (rs#s) for LOC105378021 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378021 Gene

Disorders for LOC105378021 Gene

No disorders were found for LOC105378021 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378021 Gene

Publications for LOC105378021 Gene

No publications were found for LOC105378021 Gene.

No data available for Mastermind for LOC105378021 Gene

Products for LOC105378021 Gene

Sources for LOC105378021 Gene