Aliases for LOC105378017 Gene

Subcategory (RNA class) for LOC105378017 Gene

ncRNA

Aliases for LOC105378017 Gene

  • Uncharacterized LOC105378017 3

External Ids for LOC105378017 Gene

Previous GeneCards Identifiers for LOC105378017 Gene

  • GC06U902861

Summaries for LOC105378017 Gene

GeneCards Summary for LOC105378017 Gene

LOC105378017 (Uncharacterized LOC105378017) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105378017 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105378017 Gene

Genomics for LOC105378017 Gene

GeneHancer (GH) Regulatory Elements for LOC105378017 Gene

Promoters and enhancers for LOC105378017 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J137313 Enhancer 1.1 Ensembl ENCODE 500.7 -0.3 -286 2.8 CTCF NCOR1 TEAD4 ZNF639 ZIC2 TCF7 REST ZBTB25 ZNF740 TGIF2 LOC105378017 HSALNG0053756
GH06J137309 Enhancer 0.8 ENCODE 0.7 +4.7 4693 0.7 RUNX1 ZNF316 NFIC MAFF MAFK CEBPB PBX2 SPI1 NFE2 ELF1 LOC105378017 piR-54987-115
GH06J137350 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -36.1 -36086 1.2 EP300 FOXK2 POLR2G NCOR1 TCF7 FOXA1 TGIF2 SKI TBX3 ZKSCAN8 HSALNG0053756 HSALNG0053751 LOC105378017
GH06J137333 Enhancer 0.8 UCNEbase Ensembl 0.4 -19.0 -18986 1 NFE2 NFIL3 ZNF350 HLF ZSCAN26 ZNF384 ZNF596 LOC105378017 HSALNG0053756 HSALNG0053751
GH06J137341 Enhancer 0.7 ENCODE dbSUPER 0.3 -28.0 -27984 0.2 CTCF RAD21 SMC3 IKZF1 MAX REST RFX5 HNRNPL RXRA SP1 OLIG3 HSALNG0053756 LOC105378017 HSALNG0053751
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105378017 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105378017 Gene

Genomic Locations for LOC105378017 Gene
chr6:137,305,772-137,314,115
(GRCh38/hg38)
Size:
8,344 bases
Orientation:
Minus strand

Genomic View for LOC105378017 Gene

Genes around LOC105378017 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105378017 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105378017 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105378017 Gene

Proteins for LOC105378017 Gene

Post-translational modifications for LOC105378017 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105378017 Gene

Domains & Families for LOC105378017 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105378017 Gene

Function for LOC105378017 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105378017 Gene

Localization for LOC105378017 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105378017 Gene

Pathways & Interactions for LOC105378017 Gene

PathCards logo

SuperPathways for LOC105378017 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105378017 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105378017 Gene

Drugs & Compounds for LOC105378017 Gene

No Compound Related Data Available

Transcripts for LOC105378017 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105378017 Gene

No ASD Table

Relevant External Links for LOC105378017 Gene

GeneLoc Exon Structure for
LOC105378017

No data available for mRNA/cDNA for LOC105378017 Gene

Expression for LOC105378017 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105378017 Gene

Orthologs for LOC105378017 Gene

No data available for Orthologs and Evolution for LOC105378017 Gene

Paralogs for LOC105378017 Gene

No data available for Paralogs for LOC105378017 Gene

Variants for LOC105378017 Gene

Additional dbSNP identifiers (rs#s) for LOC105378017 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105378017 Gene

Disorders for LOC105378017 Gene

No disorders were found for LOC105378017 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105378017 Gene

Publications for LOC105378017 Gene

No publications were found for LOC105378017 Gene.

No data available for Mastermind for LOC105378017 Gene

Products for LOC105378017 Gene

Sources for LOC105378017 Gene