Aliases for LOC105377994 Gene

Subcategory (RNA class) for LOC105377994 Gene

ncRNA

Aliases for LOC105377994 Gene

  • Uncharacterized LOC105377994 3

External Ids for LOC105377994 Gene

Previous GeneCards Identifiers for LOC105377994 Gene

  • GC06U902858
  • GC06P127296

Summaries for LOC105377994 Gene

GeneCards Summary for LOC105377994 Gene

LOC105377994 (Uncharacterized LOC105377994) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377994 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105377994 Gene

Genomics for LOC105377994 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105377994 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J127324 Enhancer 0.2 Ensembl 600.7 -0.6 -578 0.4 LOC105377994 ECHDC1 KIAA0408 RNA5SP217 RNF146
GH06J127340 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +18.1 18148 5.3 BRCA1 GATAD2A TEAD4 PRDM10 ZNF629 TFE3 SOX13 IKZF1 NFKBIZ ZNF692 ECHDC1 C6orf58 LOC107986641 lnc-RNF146-3 KIAA0408 piR-48348-066 LOC105377994 RNF146
GH06J127333 Promoter/Enhancer 0.8 Ensembl dbSUPER 0.4 +9.0 9022 0.4 ZSCAN4 IKZF2 RUNX3 SPI1 IKZF1 KIAA0408 piR-48348-066 LOC105377994 ECHDC1 RNF146
GH06J127331 Enhancer 0.7 ENCODE dbSUPER 0.4 +7.7 7717 2 ZSCAN4 NR2C1 IKZF2 SOX6 NFE2 ZNF316 FOXA2 MAFG FOXA1 NANOG ECHDC1 KIAA0408 piR-48348-066 LOC105377994 RNF146
GH06J127327 Enhancer 0.2 Ensembl 0.7 +3.3 3322 1 ECHDC1 KIAA0408 LOC105377994 piR-48348-066 RNF146
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105377994 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105377994 Gene

Genomic Locations for LOC105377994 Gene
chr6:127,324,979-127,341,875
(GRCh38/hg38)
Size:
16,897 bases
Orientation:
Plus strand

Genomic View for LOC105377994 Gene

Genes around LOC105377994 on UCSC Golden Path with GeneCards custom track
LOC105377994 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105377994 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377994 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377994 Gene

Proteins for LOC105377994 Gene

Post-translational modifications for LOC105377994 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377994 Gene

Domains & Families for LOC105377994 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105377994 Gene

Function for LOC105377994 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377994 Gene

Localization for LOC105377994 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377994 Gene

Pathways & Interactions for LOC105377994 Gene

PathCards logo

SuperPathways for LOC105377994 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105377994 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105377994 Gene

Drugs & Compounds for LOC105377994 Gene

No Compound Related Data Available

Transcripts for LOC105377994 Gene

LOC105377994 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377994 Gene

No ASD Table

Relevant External Links for LOC105377994 Gene

GeneLoc Exon Structure for
LOC105377994

No data available for mRNA/cDNA for LOC105377994 Gene

Expression for LOC105377994 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377994 Gene

Orthologs for LOC105377994 Gene

No data available for Orthologs and Evolution for LOC105377994 Gene

Paralogs for LOC105377994 Gene

No data available for Paralogs for LOC105377994 Gene

Variants for LOC105377994 Gene

Additional dbSNP identifiers (rs#s) for LOC105377994 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377994 Gene

Disorders for LOC105377994 Gene

No disorders were found for LOC105377994 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377994 Gene

Publications for LOC105377994 Gene

No publications were found for LOC105377994 Gene.

No data available for Mastermind for LOC105377994 Gene

Products for LOC105377994 Gene

Sources for LOC105377994 Gene