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Aliases for LOC105377973 Gene

Subcategory (RNA class) for LOC105377973 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105377973 Gene

  • Uncharacterized LOC105377973 3

External Ids for LOC105377973 Gene

Previous GeneCards Identifiers for LOC105377973 Gene

  • GC06U902802

Summaries for LOC105377973 Gene

GeneCards Summary for LOC105377973 Gene

LOC105377973 (Uncharacterized LOC105377973) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377973 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105377973 Gene

Genomics for LOC105377973 Gene

GeneHancer (GH) Regulatory Elements for LOC105377973 Gene

Promoters and enhancers for LOC105377973 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I119480 Enhancer 0.5 Ensembl 550.8 -1.8 -1843 0.2 NFIC ZNF362 NFIB IKZF1 CEBPB CEBPG ZNF384 LOC105377973 LOC285762
GH06I119475 Enhancer 0.5 dbSUPER 0.8 +2.1 2119 1.4 POLR2A NR2F1 IKZF1 BATF SPI1 LOC105377973 LOC285762 PIR44683
GH06I119458 Enhancer 0.9 ENCODE dbSUPER 0.4 +19.1 19080 1.4 HDGF RB1 IRF4 RELA ZNF316 BCLAF1 IKZF2 RUNX3 MAFK SRF MAN1A1 LOC105377973 LOC285762 PIR44683
GH06I119445 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +32.4 32431 2.1 PKNOX1 NFIB ARNT BATF TCF12 ATF7 RUNX3 JUNB CEBPB ZEB2 RPL13AP15 MAN1A1 LOC105377973 PIR44683
GH06I119442 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.3 +35.3 35277 2 ELF3 TFAP4 FOXA2 SAP130 RARA TRIM24 HOMEZ MIXL1 SOX5 ZNF687 RPL13AP15 MAN1A1 LOC105377973 PIR44683
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105377973 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105377973 Gene

Genomic Locations for LOC105377973 Gene
chr6:119,473,412-119,478,658
(GRCh38/hg38)
Size:
5,247 bases
Orientation:
Minus strand

Genomic View for LOC105377973 Gene

Genes around LOC105377973 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105377973 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377973 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377973 Gene

Proteins for LOC105377973 Gene

Post-translational modifications for LOC105377973 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377973 Gene

Domains & Families for LOC105377973 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105377973 Gene

Function for LOC105377973 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377973 Gene

Localization for LOC105377973 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377973 Gene

Pathways & Interactions for LOC105377973 Gene

SuperPathways for LOC105377973 Gene

No Data Available

Interacting Proteins for LOC105377973 Gene

Gene Ontology (GO) - Biological Process for LOC105377973 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105377973 Gene

Drugs & Compounds for LOC105377973 Gene

No Compound Related Data Available

Transcripts for LOC105377973 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377973 Gene

No ASD Table

Relevant External Links for LOC105377973 Gene

GeneLoc Exon Structure for
LOC105377973

No data available for mRNA/cDNA for LOC105377973 Gene

Expression for LOC105377973 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377973 Gene

Orthologs for LOC105377973 Gene

No data available for Orthologs and Evolution for LOC105377973 Gene

Paralogs for LOC105377973 Gene

No data available for Paralogs for LOC105377973 Gene

Variants for LOC105377973 Gene

Sequence variations from dbSNP and Humsavar for LOC105377973 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1001338306 -- 119,476,600(-) G/T intron_variant
rs1001480514 -- 119,480,635(-) A/G upstream_transcript_variant
rs1001821840 -- 119,477,958(-) C/T non_coding_transcript_variant
rs1002491915 -- 119,479,206(-) C/T upstream_transcript_variant
rs1002586817 -- 119,479,413(-) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377973 Gene

Disorders for LOC105377973 Gene

No disorders were found for LOC105377973 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377973 Gene

Publications for LOC105377973 Gene

No publications were found for LOC105377973 Gene.

Products for LOC105377973 Gene

Sources for LOC105377973 Gene

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