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Aliases for LOC105377891 Gene

Subcategory (RNA class) for LOC105377891 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105377891 Gene

  • Uncharacterized LOC105377891 3
  • AL132996.1 5

External Ids for LOC105377891 Gene

Previous GeneCards Identifiers for LOC105377891 Gene

  • GC06U902934

Summaries for LOC105377891 Gene

GeneCards Summary for LOC105377891 Gene

LOC105377891 (Uncharacterized LOC105377891) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377891 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105377891 Gene

Genomics for LOC105377891 Gene

GeneHancer (GH) Regulatory Elements for LOC105377891 Gene

Promoters and enhancers for LOC105377891 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I090350 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 +19.6 19566 1.5 ATF1 PKNOX1 YY1 GATA2 ATF7 CREM CEBPB NCOA1 ELF1 ZEB2 GJA10 ENSG00000252891 LOC105377891 GC06P090371 GC06M090337
GH06I090367 Enhancer 1.5 FANTOM5 Ensembl ENCODE 0.3 +38.1 38149 3.5 PKNOX1 ARNT NEUROD1 SIN3A FEZF1 ZNF2 IRF4 ZNF766 ZNF213 ZNF143 GC06P090371 MAP3K7 CASP8AP2 MDN1 GC06M090369 LOC105377891 GC06M090337
GH06I090351 Enhancer 0.7 ENCODE 0.3 +20.6 20597 0.2 MEIS2 FOXA2 MAX CEBPG RAD21 YY1 POLR2A NFE2 RXRA CEBPB GJA10 ENSG00000252891 GC06P090371 LOC105377891 GC06M090337
GH06I090314 Enhancer 0.5 ENCODE dbSUPER 0.4 -15.8 -15847 2.6 POLR2A MIR4464 LOC105377891
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105377891 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105377891 Gene

Genomic Locations for LOC105377891 Gene
chr6:90,331,360-90,362,632
(GRCh38/hg38)
Size:
31,273 bases
Orientation:
Plus strand
chr6:91,054,938-91,072,351
(GRCh37/hg19)

Genomic View for LOC105377891 Gene

Genes around LOC105377891 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105377891 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377891 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377891 Gene

Proteins for LOC105377891 Gene

Post-translational modifications for LOC105377891 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377891 Gene

Domains & Families for LOC105377891 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105377891 Gene

Function for LOC105377891 Gene

Phenotypes From GWAS Catalog for LOC105377891 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377891 Gene

Localization for LOC105377891 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377891 Gene

Pathways & Interactions for LOC105377891 Gene

SuperPathways for LOC105377891 Gene

No Data Available

Interacting Proteins for LOC105377891 Gene

Gene Ontology (GO) - Biological Process for LOC105377891 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105377891 Gene

Drugs & Compounds for LOC105377891 Gene

No Compound Related Data Available

Transcripts for LOC105377891 Gene

mRNA/cDNA for LOC105377891 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377891 Gene

No ASD Table

Relevant External Links for LOC105377891 Gene

GeneLoc Exon Structure for
LOC105377891

Expression for LOC105377891 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377891 Gene

Orthologs for LOC105377891 Gene

Evolution for LOC105377891 Gene

ENSEMBL:
Gene Tree for LOC105377891 (if available)
TreeFam:
Gene Tree for LOC105377891 (if available)

No data available for Orthologs for LOC105377891 Gene

Paralogs for LOC105377891 Gene

No data available for Paralogs for LOC105377891 Gene

Variants for LOC105377891 Gene

Sequence variations from dbSNP and Humsavar for LOC105377891 Gene

SNP ID Clin Chr 06 pos Variation AA Info Type
rs1000079405 -- 90,335,025(+) C/A/T intron_variant
rs1000231449 -- 90,322,152(+) C/A intron_variant
rs1000260694 -- 90,331,884(+) C/G intron_variant
rs1000291252 -- 90,314,881(+) T/C intron_variant
rs1000305572 -- 90,335,339(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377891 Gene

Disorders for LOC105377891 Gene

No disorders were found for LOC105377891 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377891 Gene

Publications for LOC105377891 Gene

No publications were found for LOC105377891 Gene.

Products for LOC105377891 Gene

Sources for LOC105377891 Gene

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