Aliases for LOC105377750 Gene

Subcategory (RNA class) for LOC105377750 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105377750 Gene

  • Uncharacterized LOC105377750 3

External Ids for LOC105377750 Gene

Previous GeneCards Identifiers for LOC105377750 Gene

  • GC05U902309

Summaries for LOC105377750 Gene

GeneCards Summary for LOC105377750 Gene

LOC105377750 (Uncharacterized LOC105377750) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377750 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105377750 Gene

Genomics for LOC105377750 Gene

GeneHancer (GH) Regulatory Elements for LOC105377750 Gene

Promoters and enhancers for LOC105377750 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J177552 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 750.6 -0.4 -444 3.2 SIN3A ZBTB40 CTCF SIX5 RBPJ POLR2A NR2F1 ATF1 CREB1 HCFC1 FAM193B ENSG00000272459 LOC105377750 lnc-DDX41-4 TMED9 LMAN2 PHYKPL HNRNPAB MXD3 DOK3
GH05J177556 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.6 +2.8 2817 1.5 ZBTB40 SMARCE1 POLR2A MYC L3MBTL2 MAX ZFX CBFA2T2 SP7 ZSCAN21 FAM193B MXD3 UIMC1 DOK3 ENSG00000272459 LOC105377750 piR-49423-218
GH05J177561 Enhancer 0.8 Ensembl 0.4 +7.0 7030 0.9 CTCF SMARCE1 CC2D1A L3MBTL2 RAD21 ZNF280D CBFA2T2 SMARCA4 PRDM1 ZNF680 piR-49423-218 DOK3 LOC105377750 lnc-FAM193B-1
GH05J177559 Enhancer 0.5 Ensembl 0.4 +5.1 5061 0.6 CBFA2T2 NCOR1 MNT DPF2 TCF12 TAL1 KDM1A CBFA2T3 piR-49423-218 DOK3 B4GALT7 ENSG00000272459 LOC105377750
GH05J177575 Enhancer 0.3 Ensembl 0.3 +20.8 20773 0.8 ATF2 piR-30791-084 piR-60946 FAM153CP lnc-FAM193B-1 LOC105377750
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105377750 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105377750 Gene

Genomic Locations for LOC105377750 Gene
chr5:177,554,628-177,575,299
(GRCh38/hg38)
Size:
20,672 bases
Orientation:
Plus strand

Genomic View for LOC105377750 Gene

Genes around LOC105377750 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105377750 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377750 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377750 Gene

Proteins for LOC105377750 Gene

Post-translational modifications for LOC105377750 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377750 Gene

Domains & Families for LOC105377750 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105377750 Gene

Function for LOC105377750 Gene

Phenotypes From GWAS Catalog for LOC105377750 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377750 Gene

Localization for LOC105377750 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377750 Gene

Pathways & Interactions for LOC105377750 Gene

PathCards logo

SuperPathways for LOC105377750 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105377750 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105377750 Gene

Drugs & Compounds for LOC105377750 Gene

No Compound Related Data Available

Transcripts for LOC105377750 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377750 Gene

No ASD Table

Relevant External Links for LOC105377750 Gene

GeneLoc Exon Structure for
LOC105377750

No data available for mRNA/cDNA for LOC105377750 Gene

Expression for LOC105377750 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377750 Gene

Orthologs for LOC105377750 Gene

No data available for Orthologs and Evolution for LOC105377750 Gene

Paralogs for LOC105377750 Gene

No data available for Paralogs for LOC105377750 Gene

Variants for LOC105377750 Gene

Sequence variations from dbSNP and Humsavar for LOC105377750 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000045813 -- 177,569,685(+) C/T intron_variant, non_coding_transcript_variant
rs1000076428 -- 177,564,758(+) G/C intron_variant
rs1000079228 -- 177,562,192(+) AAAA/AA intron_variant
rs1000196598 -- 177,562,435(+) G/C intron_variant
rs1000289340 -- 177,568,010(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377750 Gene

Disorders for LOC105377750 Gene

No disorders were found for LOC105377750 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377750 Gene

Publications for LOC105377750 Gene

No publications were found for LOC105377750 Gene.

No data available for External Links for LOC105377750 Gene

Products for LOC105377750 Gene

Sources for LOC105377750 Gene