Aliases for LOC105377744 Gene

Subcategory (RNA class) for LOC105377744 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105377744 Gene

  • Uncharacterized LOC105377744 3

External Ids for LOC105377744 Gene

Previous GeneCards Identifiers for LOC105377744 Gene

  • GC05U902495

Summaries for LOC105377744 Gene

GeneCards Summary for LOC105377744 Gene

LOC105377744 (Uncharacterized LOC105377744) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377744 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105377744 Gene

Genomics for LOC105377744 Gene

GeneHancer (GH) Regulatory Elements for LOC105377744 Gene

Promoters and enhancers for LOC105377744 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J175797 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 +29.5 29534 1.8 SIN3A ZBTB40 SREBF1 ZBTB6 MLX RBPJ CTBP1 USF2 NR2F1 MIXL1 CPLX2 lnc-HRH2-4 FAF2 LOC105377744 RF00017-5128
GH05J175821 Enhancer 0.8 Ensembl ENCODE 0.6 +3.9 3854 3.2 ETV6 MAX HES1 ZNF747 YBX1 EED POLR2A JUNB ZFHX2 FOSL2 FAF2 LOC105377744 CPLX2 lnc-HRH2-4 RF00017-5128
GH05J175809 Enhancer 0.9 Ensembl ENCODE 0.4 +17.1 17148 1.8 SIN3A ZNF217 HLF ZBTB33 MAFK FOSL2 POLR2A PRDM10 CTBP1 ZEB2 CPLX2 lnc-HRH2-4 LOC105377744 RF00017-5128
GH05J175814 Enhancer 0.8 Ensembl ENCODE 0.4 +12.4 12390 1.9 SIN3A CEBPB REST ZNF692 JUND ATF3 MAX SP1 ZNF318 FOS LOC105377744 lnc-HRH2-4 CPLX2 RF00017-5128
GH05J175830 Enhancer 0.4 Ensembl 0.6 -3.5 -3452 1.4 POLR2A ZNF692 ZFP69B ZFHX2 LOC105377744 piR-58400 CPLX2 lnc-HRH2-4 RF00017-5128
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105377744 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105377744 Gene

Genomic Locations for LOC105377744 Gene
chr5:175,824,372-175,827,049
(GRCh38/hg38)
Size:
2,678 bases
Orientation:
Minus strand

Genomic View for LOC105377744 Gene

Genes around LOC105377744 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105377744 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377744 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377744 Gene

Proteins for LOC105377744 Gene

Post-translational modifications for LOC105377744 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377744 Gene

Domains & Families for LOC105377744 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105377744 Gene

Function for LOC105377744 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377744 Gene

Localization for LOC105377744 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377744 Gene

Pathways & Interactions for LOC105377744 Gene

PathCards logo

SuperPathways for LOC105377744 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105377744 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105377744 Gene

Drugs & Compounds for LOC105377744 Gene

No Compound Related Data Available

Transcripts for LOC105377744 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377744 Gene

No ASD Table

Relevant External Links for LOC105377744 Gene

GeneLoc Exon Structure for
LOC105377744

No data available for mRNA/cDNA for LOC105377744 Gene

Expression for LOC105377744 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377744 Gene

Orthologs for LOC105377744 Gene

No data available for Orthologs and Evolution for LOC105377744 Gene

Paralogs for LOC105377744 Gene

No data available for Paralogs for LOC105377744 Gene

Variants for LOC105377744 Gene

Sequence variations from dbSNP and Humsavar for LOC105377744 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1001120 -- 175,822,546(-) G/A non_coding_transcript_variant
rs1001240010 -- 175,822,261(-) A/T non_coding_transcript_variant
rs1001299875 -- 175,827,085(-) A/C non_coding_transcript_variant
rs1001353808 -- 175,828,252(-) T/C/G upstream_transcript_variant
rs1001667700 -- 175,827,357(-) T/C non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377744 Gene

Disorders for LOC105377744 Gene

No disorders were found for LOC105377744 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377744 Gene

Publications for LOC105377744 Gene

No publications were found for LOC105377744 Gene.

No data available for External Links for LOC105377744 Gene

Products for LOC105377744 Gene

Sources for LOC105377744 Gene