Aliases for LOC105377741 Gene

Subcategory (RNA class) for LOC105377741 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105377741 Gene

  • Uncharacterized LOC105377741 3

External Ids for LOC105377741 Gene

Previous GeneCards Identifiers for LOC105377741 Gene

  • GC05U902167

Summaries for LOC105377741 Gene

GeneCards Summary for LOC105377741 Gene

LOC105377741 (Uncharacterized LOC105377741) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377741 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105377741 Gene

Genomics for LOC105377741 Gene

GeneHancer (GH) Regulatory Elements for LOC105377741 Gene

Promoters and enhancers for LOC105377741 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J174717 Enhancer 0.9 FANTOM5 ENCODE 750.6 -1.3 -1308 4.5 ZBTB6 FOSL2 TCF7L2 PRDM10 ZBTB33 ZEB2 ZBTB20 EZH2 ZNF157 ZFHX2 LOC105377741 MSX2 RF00017-5122
GH05J174722 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.6 +4.5 4541 5.8 ZBTB6 ZNF217 ZNF362 MNT POLR2A SP1 ZNF384 SP7 PRDM1 CREB1 MSX2 lnc-DRD1-4 LOC105377741 HSALNG0046775
GH05J174692 Enhancer 0.8 ENCODE CraniofacialAtlas 0.3 -28.3 -28308 1.6 ZNF362 ZNF384 PRDM1 PKNOX1 ZIC2 CTBP1 ZSCAN4 MNT EZH2 KLF4 MSX2 RF00017-5122 LOC105377741
GH05J174693 Enhancer 0.6 ENCODE 0.3 -27.4 -27408 0.2 ZNF362 NFIB ZNF384 CREB1 CTBP1 KLF4 OSR2 DPF2 ZNF217 ZNF366 MSX2 RF00017-5122 LOC105377741
GH05J174680 Enhancer 0.4 Ensembl ENCODE 0.3 -40.2 -40166 1.8 USF1 MSX2 RF00017-5122 LOC105377741
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105377741 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105377741 Gene

Genomic Locations for LOC105377741 Gene
chr5:174,721,321-174,724,123
(GRCh38/hg38)
Size:
2,803 bases
Orientation:
Plus strand

Genomic View for LOC105377741 Gene

Genes around LOC105377741 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105377741 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377741 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377741 Gene

Proteins for LOC105377741 Gene

Post-translational modifications for LOC105377741 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377741 Gene

Domains & Families for LOC105377741 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105377741 Gene

Function for LOC105377741 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377741 Gene

Localization for LOC105377741 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377741 Gene

Pathways & Interactions for LOC105377741 Gene

PathCards logo

SuperPathways for LOC105377741 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105377741 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105377741 Gene

Drugs & Compounds for LOC105377741 Gene

No Compound Related Data Available

Transcripts for LOC105377741 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377741 Gene

No ASD Table

Relevant External Links for LOC105377741 Gene

GeneLoc Exon Structure for
LOC105377741

No data available for mRNA/cDNA for LOC105377741 Gene

Expression for LOC105377741 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377741 Gene

Orthologs for LOC105377741 Gene

No data available for Orthologs and Evolution for LOC105377741 Gene

Paralogs for LOC105377741 Gene

No data available for Paralogs for LOC105377741 Gene

Variants for LOC105377741 Gene

Sequence variations from dbSNP and Humsavar for LOC105377741 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs371076863 uncertain-significance, Craniosynostosis, Enlarged parietal foramina 174,724,610(+) C/A/G/T downstream_transcript_variant
rs758437365 uncertain-significance, Craniosynostosis, Enlarged parietal foramina 174,724,618(+) C/G/T downstream_transcript_variant
rs1000110266 -- 174,724,039(+) G/A intron_variant
rs1000679679 -- 174,720,728(+) A/G upstream_transcript_variant
rs1000754476 -- 174,720,512(+) G/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377741 Gene

Disorders for LOC105377741 Gene

No disorders were found for LOC105377741 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377741 Gene

Publications for LOC105377741 Gene

No publications were found for LOC105377741 Gene.

No data available for External Links for LOC105377741 Gene

Products for LOC105377741 Gene

Sources for LOC105377741 Gene