Aliases for LOC105377732 Gene

Subcategory (RNA class) for LOC105377732 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105377732 Gene

  • Uncharacterized LOC105377732 3
  • CTB-164N12.1 3
  • CTB-32H22.1 3

External Ids for LOC105377732 Gene

Previous GeneCards Identifiers for LOC105377732 Gene

  • GC05U902348

Summaries for LOC105377732 Gene

GeneCards Summary for LOC105377732 Gene

LOC105377732 (Uncharacterized LOC105377732) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377732 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105377732 Gene

Genomics for LOC105377732 Gene

GeneHancer (GH) Regulatory Elements for LOC105377732 Gene

Promoters and enhancers for LOC105377732 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J173450 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +70.3 70292 9.6 CTCF GATA3 SREBF1 SMARCE1 POLR2A TCF7L2 USF2 ZNF217 MYC L3MBTL2 CREBRF CPEB4 ENSG00000253141 MG828668-101 ENSG00000253968 LOC105377732
GH05J173395 Enhancer 0.6 Ensembl ENCODE 0.4 +11.8 11781 3.1 MYC ZBTB33 FOS GABPA CTCF RNU6-500P LOC105377732 ENSG00000253968 piR-45874-204
GH05J173471 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +90.0 90003 7.3 E2F8 LCORL HLF NCOA3 ZNF644 FOSL2 CREB1 SOX13 CTBP1 JUN lnc-BNIP1-4 RNU6-500P ATP6V0E1 ENSG00000253141 lnc-BNIP1-6 LOC105377732
GH05J173494 Enhancer 1.2 FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.1 +113.1 113149 7.2 USF2 CEBPG ZBTB33 RXRB ESRRA USF1 TEAD1 GATA3 TFAP4 HNF4A STC2 lnc-BNIP1-6 lnc-BNIP1-4 LOC105377732
GH05J173483 Enhancer 0.7 Ensembl ENCODE 0.2 +98.7 98749 0.4 NCOA3 CREB1 ZBTB33 CTBP1 KLF17 FOS NFATC1 RNU6-500P lnc-BNIP1-4 ENSG00000253141 lnc-BNIP1-6 LOC105377732
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105377732 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105377732 Gene

Genomic Locations for LOC105377732 Gene
chr5:173,385,052-173,524,433
(GRCh38/hg38)
Size:
139,382 bases
Orientation:
Plus strand

Genomic View for LOC105377732 Gene

Genes around LOC105377732 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105377732 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377732 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377732 Gene

Proteins for LOC105377732 Gene

Post-translational modifications for LOC105377732 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377732 Gene

Domains & Families for LOC105377732 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105377732 Gene

Function for LOC105377732 Gene

Phenotypes From GWAS Catalog for LOC105377732 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377732 Gene

Localization for LOC105377732 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377732 Gene

Pathways & Interactions for LOC105377732 Gene

PathCards logo

SuperPathways for LOC105377732 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105377732 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105377732 Gene

Drugs & Compounds for LOC105377732 Gene

No Compound Related Data Available

Transcripts for LOC105377732 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377732 Gene

No ASD Table

Relevant External Links for LOC105377732 Gene

GeneLoc Exon Structure for
LOC105377732

No data available for mRNA/cDNA for LOC105377732 Gene

Expression for LOC105377732 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377732 Gene

Orthologs for LOC105377732 Gene

No data available for Orthologs and Evolution for LOC105377732 Gene

Paralogs for LOC105377732 Gene

No data available for Paralogs for LOC105377732 Gene

Variants for LOC105377732 Gene

Sequence variations from dbSNP and Humsavar for LOC105377732 Gene

SNP ID Clin Chr 05 pos Variation AA Info Type
rs1000064293 -- 173,440,392(+) C/A intron_variant
rs1000076695 -- 173,431,656(+) A/G intron_variant
rs1000083080 -- 173,471,081(+) T/C intron_variant
rs1000093599 -- 173,520,674(+) G/A intron_variant
rs1000123736 -- 173,479,824(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377732 Gene

Disorders for LOC105377732 Gene

No disorders were found for LOC105377732 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377732 Gene

Publications for LOC105377732 Gene

No publications were found for LOC105377732 Gene.

No data available for External Links for LOC105377732 Gene

Products for LOC105377732 Gene

Sources for LOC105377732 Gene