Aliases for LOC105377709 Gene

Subcategory (RNA class) for LOC105377709 Gene

ncRNA

Aliases for LOC105377709 Gene

  • Uncharacterized LOC105377709 3
  • CTC-353G13.1 3

External Ids for LOC105377709 Gene

Previous GeneCards Identifiers for LOC105377709 Gene

  • GC05U902434

Summaries for LOC105377709 Gene

GeneCards Summary for LOC105377709 Gene

LOC105377709 (Uncharacterized LOC105377709) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377709 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105377709 Gene

Genomics for LOC105377709 Gene

GeneHancer (GH) Regulatory Elements for LOC105377709 Gene

Promoters and enhancers for LOC105377709 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J167952 Enhancer 0.6 CraniofacialAtlas dbSUPER 500.7 +0.7 664 1.4 TEAD4 FOXA1 PKNOX1 ENSG00000253660 LOC105377709 piR-49732-484 TENM2
GH05J167949 Promoter/Enhancer 1 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 +3.1 3144 2.8 EGR1 MYC ENSG00000253660 LOC105377709 piR-49732-484 TENM2
GH05J167942 Enhancer 1.1 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 +8.5 8493 5.1 FOS EP300 CEBPB POLR2A JUN JUND STAT1 STAT3 ZNF664 SMARCA4 FBLL1 ENSG00000253660 LOC105377709 piR-49732-484 TENM2
GH05J167964 Enhancer 0.3 Ensembl 0.4 -11.2 -11241 0.4 CTCF ZNF652 ENSG00000253947 LOC105377709 TENM2
GH05J167937 Enhancer 0.3 Ensembl dbSUPER 0.4 +13.0 12960 0.4 LOC105377709 ENSG00000253660 piR-49732-484 TENM2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105377709 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105377709 Gene

Genomic Locations for LOC105377709 Gene
chr5:167,937,077-167,953,560
(GRCh38/hg38)
Size:
16,484 bases
Orientation:
Minus strand

Genomic View for LOC105377709 Gene

Genes around LOC105377709 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105377709 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377709 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377709 Gene

Proteins for LOC105377709 Gene

Post-translational modifications for LOC105377709 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377709 Gene

Domains & Families for LOC105377709 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105377709 Gene

Function for LOC105377709 Gene

Phenotypes From GWAS Catalog for LOC105377709 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377709 Gene

Localization for LOC105377709 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377709 Gene

Pathways & Interactions for LOC105377709 Gene

PathCards logo

SuperPathways for LOC105377709 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105377709 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105377709 Gene

Drugs & Compounds for LOC105377709 Gene

No Compound Related Data Available

Transcripts for LOC105377709 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377709 Gene

No ASD Table

Relevant External Links for LOC105377709 Gene

GeneLoc Exon Structure for
LOC105377709

No data available for mRNA/cDNA for LOC105377709 Gene

Expression for LOC105377709 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC105377709

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377709 Gene

Orthologs for LOC105377709 Gene

No data available for Orthologs and Evolution for LOC105377709 Gene

Paralogs for LOC105377709 Gene

No data available for Paralogs for LOC105377709 Gene

Variants for LOC105377709 Gene

Additional dbSNP identifiers (rs#s) for LOC105377709 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377709 Gene

Disorders for LOC105377709 Gene

No disorders were found for LOC105377709 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377709 Gene

Publications for LOC105377709 Gene

No publications were found for LOC105377709 Gene.

No data available for Mastermind for LOC105377709 Gene

Products for LOC105377709 Gene

Sources for LOC105377709 Gene