Aliases for LOC105377558 Gene

Data sources for LOC105377558 Gene:

RNA type for LOC105377558 Gene

ncRNA

Aliases for LOC105377558 Gene

External Ids for LOC105377558 Gene

Previous GeneCards Identifiers for LOC105377558 Gene

  • GC04U902488

Summaries for LOC105377558 Gene

GeneCards Summary for LOC105377558 Gene

LOC105377558 (Uncharacterized LOC105377558) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377558 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105377558 Gene

Genomics for LOC105377558 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105377558 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J177339 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +21.6 21565 0.5 ZNF654 REST TRIM22 CTCF NR2C1 RAD21 SMC3 EGR1 NR2F1 NR2F6 ENSG00000249008 NEIL3 HSALNG0038745 LOC105377558 AGA
GH04J177374 Enhancer 0.5 Ensembl 0.4 -14.0 -13968 2 ZBTB40 SPI1 RFX1 CTCF RAD21 AGA ENSG00000249084 LOC105377558 NEIL3
GH04J177351 Enhancer 0.2 Ensembl 0.4 +9.7 9732 0.2 ENSG00000249008 NEIL3 LOC105377558 HSALNG0038745 ENSG00000249084 AGA
GH04J177336 Enhancer 0.2 Ensembl 0.4 +24.4 24432 0.4 HSALNG0038745 NEIL3 ENSG00000249008 LOC105377558 AGA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105377558 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105377558 Gene

Latest Assembly
chr4:177,342,617-177,361,433
(GRCh38/hg38)
Size:
18,817 bases
Orientation:
Minus strand

Genomic View for LOC105377558 Gene

Genes around LOC105377558 on UCSC Golden Path with GeneCards custom track
LOC105377558 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105377558 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377558 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377558 Gene

Proteins for LOC105377558 Gene

Post-translational modifications for LOC105377558 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377558 Gene

Domains & Families for LOC105377558 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105377558 Gene

Function for LOC105377558 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377558 Gene

Localization for LOC105377558 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377558 Gene

Pathways & Interactions for LOC105377558 Gene

PathCards logo

SuperPathways for LOC105377558 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105377558 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105377558 Gene

Drugs & Compounds for LOC105377558 Gene

No Compound Related Data Available

Transcripts for LOC105377558 Gene

LOC105377558 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377558 Gene

No ASD Table

Relevant External Links for LOC105377558 Gene

GeneLoc Exon Structure for
LOC105377558

No data available for mRNA/cDNA for LOC105377558 Gene

Expression for LOC105377558 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377558 Gene

Orthologs for LOC105377558 Gene

No data available for Orthologs and Evolution for LOC105377558 Gene

Paralogs for LOC105377558 Gene

No data available for Paralogs for LOC105377558 Gene

Variants for LOC105377558 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105377558 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377558 Gene

Disorders for LOC105377558 Gene

No disorders were found for LOC105377558 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377558 Gene

Publications for LOC105377558 Gene

No publications were found for LOC105377558 Gene.

No data available for Mastermind for LOC105377558 Gene

Products for LOC105377558 Gene

Sources for LOC105377558 Gene