LOC105377546 Gene (RNA Gene)

Uncharacterized LOC105377546

GC04P174005
GIFtS:
3

Aliases for LOC105377546 Gene

Subcategory (RNA class) for LOC105377546 Gene

ncRNA

Aliases for LOC105377546 Gene

  • Uncharacterized LOC105377546 3

External Ids for LOC105377546 Gene

Previous GeneCards Identifiers for LOC105377546 Gene

  • GC04U902080

Summaries for LOC105377546 Gene

GeneCards Summary for LOC105377546 Gene

LOC105377546 (Uncharacterized LOC105377546) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377546 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105377546 Gene

Genomics for LOC105377546 Gene

GeneHancer (GH) Regulatory Elements for LOC105377546 Gene

Promoters and enhancers for LOC105377546 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH04J174005 Enhancer 0.7 Ensembl ENCODE 500.7 -0.1 -135 0.2 MXI1 GATA3 NCOR1 TAL1 CBFA2T2 IKZF1 CBFA2T3 LOC105377546 ENSG00000251216 lnc-CEP44-7
GH04J174036 Enhancer 1 UCNEbase FANTOM5 Ensembl 0.3 +31.4 31364 1.2 NFIC TAL1 MEIS2 MZF1 PKNOX1 CBFA2T3 ZXDB LOC105377546 lnc-CEP44-2 lnc-CEP44-7
GH04J174023 Enhancer 0.4 FANTOM5 0.4 +18.1 18118 0 JUND HIC1 POLR2A SIN3A HAND2 LOC105377546 lnc-CEP44-2 lnc-CEP44-7
GH04J174047 Enhancer 0.6 Ensembl 0.3 +41.4 41365 0.4 TCF7L2 HDAC2 NCOA1 RCOR1 GATA2 DPF2 ARID3A GATA1 ARID1B KDM1A lnc-CEP44-2 LOC105377546 lnc-CEP44-7
GH04J174040 Enhancer 0.5 Ensembl 0.3 +35.9 35865 2.6 TRIM24 CHAMP1 ATF4 ATF3 CEBPB ZNF316 LOC105377546 lnc-CEP44-2 lnc-CEP44-7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105377546 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105377546 Gene

Genomic Locations for LOC105377546 Gene
chr4:174,005,836-174,018,083
(GRCh38/hg38)
Size:
12,248 bases
Orientation:
Plus strand

Genomic View for LOC105377546 Gene

Genes around LOC105377546 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105377546 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377546 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105377546 Gene

Proteins for LOC105377546 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105377546 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377546 Gene

Domains & Families for LOC105377546 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105377546 Gene

Function for LOC105377546 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377546 Gene

Localization for LOC105377546 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377546 Gene

Pathways & Interactions for LOC105377546 Gene

PathCards logo

SuperPathways for LOC105377546 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105377546 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105377546 Gene

Drugs & Compounds for LOC105377546 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105377546 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377546 Gene

No ASD Table

Relevant External Links for LOC105377546 Gene

GeneLoc Exon Structure for
LOC105377546

No data available for mRNA/cDNA for LOC105377546 Gene

Expression for LOC105377546 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377546 Gene

Orthologs for LOC105377546 Gene

No data available for Orthologs and Evolution for LOC105377546 Gene

Paralogs for LOC105377546 Gene

No data available for Paralogs for LOC105377546 Gene

Variants for LOC105377546 Gene

Additional dbSNP identifiers (rs#s) for LOC105377546 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377546 Gene

Disorders for LOC105377546 Gene

No disorders were found for LOC105377546 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377546 Gene

Publications for LOC105377546 Gene

No publications were found for LOC105377546 Gene.

No data available for Mastermind for LOC105377546 Gene

Products for LOC105377546 Gene

Sources for LOC105377546 Gene