Aliases for LOC105377543 Gene

Data sources for LOC105377543 Gene:

Subcategory (RNA class) for LOC105377543 Gene

ncRNA

Aliases for LOC105377543 Gene

External Ids for LOC105377543 Gene

Previous GeneCards Identifiers for LOC105377543 Gene

  • GC04U901922

Summaries for LOC105377543 Gene

GeneCards Summary for LOC105377543 Gene

LOC105377543 (Uncharacterized LOC105377543) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377543 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105377543 Gene

Genomics for LOC105377543 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105377543 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J173990 Promoter 0.7 Ensembl 250.7 +0.1 74 0.2 REST ZNF316 GATA2 ZNF512 CTCF CHD2 EP300 SMC3 NR2F2 LOC105377543 ENSG00000251216 MK280073-510 lnc-CEP44-7 FBXO8 LINC02269 HAND2
GH04J173937 Enhancer 0.7 Ensembl 0.2 +55.7 55674 0.6 FEZF1 ZNF610 KLF7 ZNF341 ZNF843 PRDM6 INSM2 FOXK2 ZNF664 RCOR1 lnc-CEP44-7 lnc-FBXO8-8 lnc-CEP44-8 LOC105377543 ENSG00000251216 LINC02269 FBXO8 HAND2
GH04J173958 Enhancer 0.5 Ensembl 0.3 +32.4 32374 0.4 NFE2 MEIS2 ATF2 PKNOX1 HMBOX1 HSALNG0038622 LOC105377544 lnc-CEP44-7 LOC105377543 ENSG00000251216 FBXO8 LINC02269 HAND2
GH04J173935 Enhancer 0.5 FANTOM5 0.2 +55.1 55050 0.4 GATA2 ZNF384 CEBPB WT1 lnc-CEP44-7 lnc-FBXO8-8 HAND2 LOC105377544 LOC105377543 ENSG00000251216 LINC02269 FBXO8
GH04J173936 Enhancer 0.4 Ensembl ENCODE 0.2 +54.0 53974 0.8 ZNF398 lnc-CEP44-7 lnc-FBXO8-8 ENSG00000251216 LOC105377544 LOC105377543 LINC02269 FBXO8 HAND2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105377543 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105377543 Gene

Latest Assembly
chr4:173,908,831-173,990,975
(GRCh38/hg38)
Size:
82,145 bases
Orientation:
Minus strand

Genomic View for LOC105377543 Gene

Genes around LOC105377543 on UCSC Golden Path with GeneCards custom track
LOC105377543 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105377543 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377543 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377543 Gene

Proteins for LOC105377543 Gene

Post-translational modifications for LOC105377543 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377543 Gene

Domains & Families for LOC105377543 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105377543 Gene

Function for LOC105377543 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377543 Gene

Localization for LOC105377543 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377543 Gene

Pathways & Interactions for LOC105377543 Gene

PathCards logo

SuperPathways for LOC105377543 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105377543 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105377543 Gene

Drugs & Compounds for LOC105377543 Gene

No Compound Related Data Available

Transcripts for LOC105377543 Gene

LOC105377543 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377543 Gene

No ASD Table

Relevant External Links for LOC105377543 Gene

GeneLoc Exon Structure for
LOC105377543

No data available for mRNA/cDNA for LOC105377543 Gene

Expression for LOC105377543 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377543 Gene

Orthologs for LOC105377543 Gene

No data available for Orthologs and Evolution for LOC105377543 Gene

Paralogs for LOC105377543 Gene

No data available for Paralogs for LOC105377543 Gene

Variants for LOC105377543 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105377543 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377543 Gene

Disorders for LOC105377543 Gene

No disorders were found for LOC105377543 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377543 Gene

Publications for LOC105377543 Gene

No publications were found for LOC105377543 Gene.

No data available for Mastermind for LOC105377543 Gene

Products for LOC105377543 Gene

Sources for LOC105377543 Gene