Aliases for LOC105377530 Gene

Subcategory (RNA class) for LOC105377530 Gene

ncRNA

Aliases for LOC105377530 Gene

  • Uncharacterized LOC105377530 3

External Ids for LOC105377530 Gene

Previous GeneCards Identifiers for LOC105377530 Gene

  • GC04U902219

Summaries for LOC105377530 Gene

GeneCards Summary for LOC105377530 Gene

LOC105377530 (Uncharacterized LOC105377530) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105377530 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105377530 Gene

Genomics for LOC105377530 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105377530 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J169912 Enhancer 0.2 Ensembl 600.7 +0.1 142 0.2 ENSG00000288003 LOC105377530 ENSG00000251200 LINC02275 MFAP3L HPF1 MG828730-051
GH04J169933 Enhancer 0.9 Ensembl ENCODE 0.4 +22.0 22039 2.5 HDAC1 SOX6 TCF12 EP300 CTBP1 NFE2 ZNF316 NCOR1 MAFG FOXM1 MFAP3L LINC02275 ENSG00000249955 AADAT piR-45035-145 ENSG00000287298 ENSG00000288003 LOC105377530 HPF1 MG828730-051
GH04J169919 Enhancer 0.6 Ensembl ENCODE 0.4 +7.3 7260 0.9 PRDM10 FEZF1 GLIS1 KLF1 EGR2 ENSG00000287298 piR-48348-052 AADAT ENSG00000288003 LOC105377530 LINC02275 MFAP3L HPF1 MG828730-051
GH04J169898 Enhancer 0.5 Ensembl ENCODE 0.4 -12.7 -12673 3.2 SPI1 JUND MFAP3L LOC105377530 FJ601684-364 HPF1 MG828730-051
GH04J169922 Enhancer 0.5 Ensembl 0.4 +10.3 10342 0.2 CEBPB ZNF316 MAFF MAFK MAFG EMSY ENSG00000287298 MFAP3L ENSG00000288003 LOC105377530 piR-45035-145 LINC02275 HPF1 MG828730-051
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105377530 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105377530 Gene

Genomic Locations for LOC105377530 Gene
chr4:169,912,559-169,941,401
(GRCh38/hg38)
Size:
28,843 bases
Orientation:
Plus strand

Genomic View for LOC105377530 Gene

Genes around LOC105377530 on UCSC Golden Path with GeneCards custom track
LOC105377530 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105377530 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105377530 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105377530 Gene

Proteins for LOC105377530 Gene

Post-translational modifications for LOC105377530 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105377530 Gene

Domains & Families for LOC105377530 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105377530 Gene

Function for LOC105377530 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105377530 Gene

Localization for LOC105377530 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105377530 Gene

Pathways & Interactions for LOC105377530 Gene

PathCards logo

SuperPathways for LOC105377530 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105377530 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105377530 Gene

Drugs & Compounds for LOC105377530 Gene

No Compound Related Data Available

Transcripts for LOC105377530 Gene

LOC105377530 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105377530 Gene

No ASD Table

Relevant External Links for LOC105377530 Gene

GeneLoc Exon Structure for
LOC105377530

No data available for mRNA/cDNA for LOC105377530 Gene

Expression for LOC105377530 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105377530 Gene

Orthologs for LOC105377530 Gene

No data available for Orthologs and Evolution for LOC105377530 Gene

Paralogs for LOC105377530 Gene

No data available for Paralogs for LOC105377530 Gene

Variants for LOC105377530 Gene

Additional dbSNP identifiers (rs#s) for LOC105377530 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105377530 Gene

Disorders for LOC105377530 Gene

No disorders were found for LOC105377530 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105377530 Gene

Publications for LOC105377530 Gene

No publications were found for LOC105377530 Gene.

No data available for Mastermind for LOC105377530 Gene

Products for LOC105377530 Gene

Sources for LOC105377530 Gene